Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15171g00003 ATGGCTTCCTCAAGTGAAACATCTCCACAGTCGTCTATGCTTCAAATTTCTGATTTAGAGAAGGATTTTCAGGCGCTGATGGATCAGAGGAAGAGGAAGAGGAAGAGGATGCTATCAAACCATGAATCAGCAAGGCGATCTCGAATAAGGAGAAAGACGCGCTTGGATAATCTTGTTGCAGCGGTGACTCAACTCAGGAAAGAGAATTCACAGATTCTCACATTGGTCACCGACACTACCCGAAAGTACTTGGAAGTTGAGACCGAGAACTTAGTGCTGAAAGCTCAAATGAGTGAGTTGAGTTCTTCGATTTCGGAAAAAAGAACGTATCGAGTGTTTTTGAGTTTCGAAGGGGAAGACACGAGCGCTCCTTTCGTTTCACATCTCTATGCCTCTCTTCAAAATGCCGGAATCATTGTTTTCGAGGATGAAAAGTCACTTCCAAGGGGACATCACATTTCACAGTCACAACTGCAAGCAATTGAACAGTCTCAAATTTCTGTCGTTGTATTCTCGAGAAATTATGCAGAGTCGCGATGGTGCTTGCAAGAGTTGGAGAAAATAATGGAGTGTCGCAGAACCATAGGGCAGGTGGTAGTGCCAGTGTTCTACGGTGTTGATCCCTCTGAAGTACGTCATCAAACAGGTGAGTTTGGAAAAGCATTTAAAAACCTTTCAAACGGAATTGTAACAGGGGAAGATGAGAAGCTACAGCCTTGGAGGGAGGCACTTGGTGAGGTTGCAGGCATCTCCGGGGTTGTAGTCCTAAATTCCAGTCAAAATTGCACAATTTTTAATTTGCTTTTAACCGATTAA 816 0.4375 MASSSETSPQSSMLQISDLEKDFQALMDQRKRKRKRMLSNHESARRSRIRRKTRLDNLVAAVTQLRKENSQILTLVTDTTRKYLEVETENLVLKAQMSELSSSISEKRTYRVFLSFEGEDTSAPFVSHLYASLQNAGIIVFEDEKSLPRGHHISQSQLQAIEQSQISVVVFSRNYAESRWCLQELEKIMECRRTIGQVVVPVFYGVDPSEVRHQTGEFGKAFKNLSNGIVTGEDEKLQPWREALGEVAGISGVVVLNSSQNCTIFNLLLTD 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15171g00003 271 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 35 50 IPR004827 GO:0003700|GO:0006355
Mupr15171g00003 271 SUPERFAMILY Toll/Interleukin receptor TIR domain 100 252 IPR035897 -
Mupr15171g00003 271 SUPERFAMILY Leucine zipper domain 32 82 IPR046347 GO:0003700|GO:0006355
Mupr15171g00003 271 ProSiteProfiles TIR domain profile. 108 271 IPR000157 GO:0007165
Mupr15171g00003 271 FunFam BZIP transcription factor 30 81 - -
Mupr15171g00003 271 Pfam Basic region leucine zipper 31 73 IPR004827 GO:0003700|GO:0006355
Mupr15171g00003 271 SMART till_3 109 250 IPR000157 GO:0007165
Mupr15171g00003 271 Coils Coil 16 36 - -
Mupr15171g00003 271 Gene3D - 103 270 IPR035897 -
Mupr15171g00003 271 Pfam TIR domain 110 246 IPR000157 GO:0007165
Mupr15171g00003 271 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 30 93 IPR004827 GO:0003700|GO:0006355
Mupr15171g00003 271 PANTHER TMV RESISTANCE PROTEIN N-LIKE 103 257 - -
Mupr15171g00003 271 SMART brlzneu 28 92 IPR004827 GO:0003700|GO:0006355
Mupr15171g00003 271 Gene3D - 30 83 - -
Mupr15171g00003 271 FunFam Disease resistance protein (TIR-NBS-LRR class) 106 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15171g00003 Mupr-Chr15171 9592 10491 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15171g00003 111 244 Miscellaneous Gene Families AT1G57830 41.045 1.52e-26 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mupr15171g00003 TIR 2.2e-40 CL0173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15171g00003 - - var:108322522 282.337