Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1515g00003 ATGGTTTCCCTCTCCACCACCCCCTTTTTACCCTTCACTGCACCAAACGCTTCTACTAGAATTTCTCCCCCCAATTCCTTCCATTACAACAAGTACCGTAACAAGGATCACAGGAAGGTCGTCTGCGCCTGCATCGCACCTCCGCAAAACTTCAAGAGCCAAGACATTAATTTCAATGGTTTGTCCAAATCAGAACAATTGAGCACGGCGCGGGATCACGAGGATGATTCTGATGTTCTTATTGAGTGTAGAGATGTGTACAAGTCTTTTGGGGAAAAGAAAATCTTAAATGGTGTCAGCTTCAAGATCAGGCATGGTGAGGCTGTTGGAATAATTGGTCCCTCTGGGACTGGTAAATCTACAGTTTTGAAGATTATTGCAGGACTTCTTGCTCCGGACAAGGGGCAGGTTTATATTCAAGGTAAAAAGAGGGTTGGTTTAGTGAGCGATGATGACATATCTGGTCTTCGAATTGGATTAGTTTTCCAAAGTGCAGCACTCTTTGATTCTTTGACTGTTCGAGAAAATGTTGGTTTTCTCTTGTATGAACACTCAAGCATGTCTGAGGACCAGATATCAGAGCTTGTCAAGGACACCTTGGCTGCAGTTGGATTGAAGGGAGTTGAGGATCGGTTGCCTTCTGAGTTATCAGGTGGGATGAAAAAGCGAGTTGCTTTAGCTCGATCTATTATTTGTGACACCACAAAGGAATCAATTGAGCCAGAGGTGCTCTTGTATGATGAACCAACTGCCGGACTTGATCCCATTGCATCTACTGTTGTTGAGGATCTGATTCGTTCTGTGCACATAAAAGGAAAAGATGCACGTGGAAAACTTGGGAATATTGCATCTTATGTGGTTGTTACTCACCAACATAGTACCATTAAAAGAGCCATTGATAGATTGTTGTTTCTACACAAGGGAAAAATTGTTTGGGAAGGAATGACTCATGAATTTACAACTTCAACGAATCCAATTGTTCAGCAGATTTGGCCATTCACTTTGGATTAG 1011 0.4263 MVSLSTTPFLPFTAPNASTRISPPNSFHYNKYRNKDHRKVVCACIAPPQNFKSQDINFNGLSKSEQLSTARDHEDDSDVLIECRDVYKSFGEKKILNGVSFKIRHGEAVGIIGPSGTGKSTVLKIIAGLLAPDKGQVYIQGKKRVGLVSDDDISGLRIGLVFQSAALFDSLTVRENVGFLLYEHSSMSEDQISELVKDTLAAVGLKGVEDRLPSELSGGMKKRVALARSIICDTTKESIEPEVLLYDEPTAGLDPIASTVVEDLIRSVHIKGKDARGKLGNIASYVVVTHQHSTIKRAIDRLLFLHKGKIVWEGMTHEFTTSTNPIVQQIWPFTLD 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1515g00003 336 Gene3D - 67 330 IPR027417 -
Mupr1515g00003 336 CDD ABC_Org_Solvent_Resistant 81 329 - -
Mupr1515g00003 336 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 25 331 - -
Mupr1515g00003 336 SMART AAA_5 105 309 IPR003593 GO:0016887
Mupr1515g00003 336 Pfam ABC transporter 96 251 IPR003439 GO:0005524
Mupr1515g00003 336 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 81 332 IPR003439 GO:0005524
Mupr1515g00003 336 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 322 IPR027417 -
Mupr1515g00003 336 ProSitePatterns ABC transporters family signature. 216 230 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1515g00003 Mupr-Chr1515 22288 26735 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1515g00003 87 325 Calmodulin-binding Proteins AT2G36910 27.559 1.17e-15 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1515g00003 - - gmx:100789283 603.979