Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15159g00001 ATGGGAGTTTCTTCAAGCTTTGGATCCATCATTTTACTCCTTGTTTTATGGAGGTTGTATAAACTTGTAAGAAAAAACATAGTGAAGAAACGCAAAGAAGAATTCTTCAAGCGAAATGGAGGATTGTTGTTAGAACAAAGATTGTCTTCTGGTGAAGTTAAGGTTGATCAATTTAAACTCTTCAACTTAAAGGACTTAGAGAAGGCCACCGACCATTTTAATATGAATAGAGTACTTGGAAAGGGAGGCCAAGGTACCGTTTACAAAGGCATGTTAATAGATGGAAAAATTGTTGCAGTGAAAAAATTTAAGGTCGAAGGCAAGGTTGAAGAATTCATCAATGAATTTGTCATTCTTTCACAAATTAACCATAGAAATGTGGTTAAGTTGTTAGGAAGTTGTTTGGAGACCGAAATTCCTTTACTTGTTTATGAATTCATTCCTAATGGTAACCTTTTTGAGTATTTGCACAAACAAAATGAGGACTTACCAATTACATGGGATATGCGTTTGAGGATTGCCATTGAAGTTGCTGGAGCTTTATTTTACTTACACTCATCTGCTGCTCAGCCTATTTATCATAGAGACATAAAGTCCACAAATATACTATTGGATGAAAAGTACAAGGCAAAAGTAGCAGACTTTGGTGCATCAAGAATGGTTTCCATTGAAGCTACTCACCTCACTACAGTAGTTCAAGGAACTTTCGGATATTTGGACCCTGAATATTTCCATACTAGTCAATTTACAGAAAAGAGTGATGTCTATAGCTTTGGAGTAGTTCTTGTTGAACTCTTAACAGGGCAAAAGCCAATATCCTCTCTAAGACCAGTGGAAGCTAGAAGTTTAACTTCGTATTTCATTCTATGTATGGAGGAAAATCGTCTGTTTGATATTATTGATGAAAGAGTCACAAAGGAGGGGAAGAAAGAACATATCATTGCAGTAGCCATTGTTGCAAGTAGATGCTTACAGTTGAATGGGAAGAAACGACCAACTATGAAGGAAGTCACATTGGAATTAGAAGGTATTCAAAAATTGGAAGGAAAGTCTAATACACAAGAAAAACAGGATGAACTTGAGCTTGTTCGAATTGAAGACTATGAATCTTGGGCTATGTATTCTACCACCTCAAACATAAGCTCAACTCCATATCTGAACAGTGGAACACCAACCTTAGAGGATGTTCATATTCTTACTATTTAA 1206 0.3599 MGVSSSFGSIILLLVLWRLYKLVRKNIVKKRKEEFFKRNGGLLLEQRLSSGEVKVDQFKLFNLKDLEKATDHFNMNRVLGKGGQGTVYKGMLIDGKIVAVKKFKVEGKVEEFINEFVILSQINHRNVVKLLGSCLETEIPLLVYEFIPNGNLFEYLHKQNEDLPITWDMRLRIAIEVAGALFYLHSSAAQPIYHRDIKSTNILLDEKYKAKVADFGASRMVSIEATHLTTVVQGTFGYLDPEYFHTSQFTEKSDVYSFGVVLVELLTGQKPISSLRPVEARSLTSYFILCMEENRLFDIIDERVTKEGKKEHIIAVAIVASRCLQLNGKKRPTMKEVTLELEGIQKLEGKSNTQEKQDELELVRIEDYESWAMYSTTSNISSTPYLNSGTPTLEDVHILTI 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15159g00001 401 SMART serkin_6 73 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr15159g00001 401 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 13 351 IPR045274 GO:0007166
Mupr15159g00001 401 Gene3D Phosphorylase Kinase; domain 1 45 146 - -
Mupr15159g00001 401 CDD STKc_IRAK 79 344 - -
Mupr15159g00001 401 FunFam Wall-associated receptor kinase 2 43 146 - -
Mupr15159g00001 401 Pfam Protein tyrosine and serine/threonine kinase 74 340 IPR001245 GO:0004672|GO:0006468
Mupr15159g00001 401 SUPERFAMILY Protein kinase-like (PK-like) 54 341 IPR011009 -
Mupr15159g00001 401 FunFam Wall-associated receptor kinase 2 147 364 - -
Mupr15159g00001 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Mupr15159g00001 401 ProSiteProfiles Protein kinase domain profile. 73 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr15159g00001 401 Gene3D Transferase(Phosphotransferase) domain 1 147 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15159g00001 Mupr-Chr15159 2497 3777 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15159g00001 1 361 Receptor kinase-like Gene Family AT1G69730 61.538 4.48e-158 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mupr15159g00001 PK_Tyr_Ser-Thr 9.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15159g00001 - - gsj:114368715 627.091