Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15158g00004 ATGGATGAATCAGGAGGTGGAAACAATGAATTGTTAGGGTGCAGAGAGCAAGAGAGGCTGGTTCCCATAGCGAACGTGAGCAGAATAATGAAGAAGGTGTTACCAAGCAACGGCAAGATTTCGAAAGAAGCAAAAGAGACTATGCAAGAGTGTGTGTCAGAGTTCATCAGCTTCATAACAGGGGAGGCGTCTGATAAGTGCCAGAATGAGAAGAAAAAGACAATCAACGGTGACGATCTTCTGTGGGCCATGACCTCACTCGGCTTCGAACACTATGCTCAACCCCTCAAAGCTTATCTCCACAACTACAGGGAGATGGAAGGAGAAAAAACTCCTATCATTGGGAACCACCATCACCATCCACTATCATCATGA 375 0.4587 MDESGGGNNELLGCREQERLVPIANVSRIMKKVLPSNGKISKEAKETMQECVSEFISFITGEASDKCQNEKKKTINGDDLLWAMTSLGFEHYAQPLKAYLHNYREMEGEKTPIIGNHHHHPLSS 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15158g00004 124 PRINTS CCAAT-binding transcription factor subunit A signature 48 66 - -
Mupr15158g00004 124 PRINTS CCAAT-binding transcription factor subunit A signature 67 85 - -
Mupr15158g00004 124 PRINTS CCAAT-binding transcription factor subunit A signature 86 104 - -
Mupr15158g00004 124 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 21 84 IPR003958 -
Mupr15158g00004 124 SUPERFAMILY Histone-fold 17 120 IPR009072 GO:0046982
Mupr15158g00004 124 ProSitePatterns NF-YB/HAP3 subunit signature. 51 67 IPR003956 GO:0005634|GO:0006355|GO:0043565
Mupr15158g00004 124 Gene3D Histone, subunit A 12 119 IPR009072 GO:0046982
Mupr15158g00004 124 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 14 111 IPR027113 GO:0001228|GO:0006355|GO:0016602
Mupr15158g00004 124 FunFam Nuclear transcription factor Y subunit B-3 9 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15158g00004 Mupr-Chr15158 17825 18199 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15158g00004 6 117 CCAAT-HAP3 Transcription Factor Family AT4G14540 74.107 1.96e-58 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mupr15158g00004 CBFD_NFYB_HMF 6.7e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15158g00004 K08065 - gmx:100305641 192.586