Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15137g00001 ATGAAGACCATCTTGTCTTCAGAGACGATGAACATTCCAGACGGCGTGAGCATCAAGGTTCACGCCAAGGTTATTGAGGTAGAGGGTCCTCGTGGAAAACTGGTTCGAGATTTCAAACATCTCAACCTCGATTTTCAACTGATCACTGACGAAAACGGCAAGAGAAAGCTTAAGATCGACGCATGGTTATGTGATTTATTGGTTTACGTGAGGAAAGTGGACATGCTTGATGGCGTTTCCGTTGTTCGATCTGAAAAGGTGAAGGATGAGTTGGTTTTGGACGGAAATGACATTGAGCTTGTTTCTAGGTCCTGCGCTCTCATTAATCAGAAATGCCATGTTAAAAACAAGGATATCCGGAAGTTCCTTGATGGTATTTATGTTAGTGAGAAGGGAACAATCCTTGAAGATAGAATCAGTCATATCATCTTCAAGCTTAAAATACAGACACCAAGTGCTTTCTGCAAATATGGGCTATTCATGAAGATCCGGCACAGGATCTTTGAATTTGCTCCTGATTTTTTTACTTTTCCTATGCTGGCTGATGTTGCAGCCATTCCTTTTTATCGTTTTTAG 576 0.4132 MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGKRKLKIDAWLCDLLVYVRKVDMLDGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTILEDRISHIIFKLKIQTPSAFCKYGLFMKIRHRIFEFAPDFFTFPMLADVAAIPFYRF 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15137g00001 191 Gene3D - 33 138 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Mupr15137g00001 191 SUPERFAMILY Ribosomal protein L6 1 57 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Mupr15137g00001 191 PANTHER 60S/50S RIBOSOMAL PROTEIN L6/L9 58 136 IPR000702 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Mupr15137g00001 191 Pfam Ribosomal protein L6 71 125 IPR020040 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Mupr15137g00001 191 SUPERFAMILY Ribosomal protein L6 69 131 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Mupr15137g00001 191 ProSitePatterns Ribosomal protein L6 signature 2. 110 131 IPR002359 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15137g00001 Mupr-Chr15137 8080 10614 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15137g00001 1 137 Cytoplasmic Ribosomal Protein Gene Family AT1G33140 57.513 3.52e-61 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15137g00001 K02940 - msin:131220993 152.91