Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15133g00002 ATGGAGGTTGAAAAAGAAGGGACAGACAGAGCTGAGAGGCTAATTGAGTTGGTGAATGAGATATCGGCGATCTCGGAATACAGGTGGGCGGTGAAGAAAGAGTACTGCAACTTGGCGCGTAGGCTGAAGCTGTTGTCTCCTTTGTTCGAAGAGATTAGGGATAGCAAGGAGCGAATCCCTGAGGAGACTTCAAAGGCCTTGATTTCCTTTAACAAAGCTATGGAATCGGCCAAGGAACTCCTCAGATTTGGAAGTCAGGGCAGCAAGATTTACATGGTTCTTGAGAGGGACCAAGTTATGAACAAATTCCATGAGGTGACTGCTCAGTTGGAACAAGCACTGGGTGGAATTTCCTACGACAAGCTTGACATATCTGATGAAGTTAAGGAGCAGGTTGACCTTGTTCTTGCCCAGTTCAGAAGAGCCAAAGGAAGAGTTGACGAAGTACCTGATGTTGAGCTGTATGGGGATCTCTTGTCTCTTTACAACAAGAGCAATGATGCAGCTACAGATCCAACTGTTCTAAAGAGCTTAGCTGAAAAATTGCAATTGATTGGAATAGCTGATCTTACACAGGAGTCACTAGCTTTGCATGAGATGGTGGTTGCCAGTGGTGGGGATCCTGGGGCGAGCATTGAGAAGATGTCGATGTTATTGAAGAAGATAAAAGATTATGCCCAAATAGAAAATCTAGAGGTGGATGATAATGTAGGAGGAAATACTCTTTCTTCAAGTTGCTGTAAAAAAGGGGCTATTGAAAAGAATTACCAGCCCCCTGTAATCCCTGATGATTTTCGGTGTCCAATTTCCCTAGAATTGATGAAGGATCCTGTCATTGTATCAACAGGACAGACTTACGAGCGTTCTTGTATAGAGAAATGGTTGGAAGAAGGGCATGGGACGTGCCCAAAAACACAGCAGACCCTCTCTAGTACTGTTCTCACACCAAACTATGTCTTACGAAGCCTCATAGCACAATGGTGCGAAGCCAATGGCATAGAACCACCAACACGACCCAGCAGTTCTGAGCCTAGTAAATCAGTATCTGCCTGCTCAACAGCTGAGCAAAGCAAGATTGAAAATCTTCTTCGAAAGCTCACATCTGGCAATCCCGAAGACCAGAGATCAGCTGCAGGTGAGATCCGCCTTCTTGCAAAGCGTAATGCAGATAACCGTGTGGCTATTGCTGAAGCTGGTGCAATACCTCTTCTTGCTGGTCTTCTCTGTATGCCTGACTCCCGCATTCAAGAGCATGCTGTGACAGCACTACTAAATCTTTCCATATGTGAAAATAACAAAGGAAGTATCATATCCTCAGGGGCAGTTCCAGGTATAGTTCATGTGCTCAAGAAGGGAAGCATGGAGGCTCGGGAAAATGCAGCAGCAACTCTTTTTAGCCTTTCAGTTGTTGATGAAAATAAAGTTACAATTGGTGCGTCAGGAGCCATACCGCCACTAGTTACTCTGTTGAATGAGGGTACCCAGAGGGGCAAGAAAGATGCTGCAACAGCACTCTTCAATTTGTGCATTTACCAGGGTAACAAAGGAAGGGCAGTGAGGGCTGGCATTATTCCCATTCTGATGCGACTGCTGACAGAACCCGGTGGAGGAATGGTAGATGAAGCATTAGCCATTTCAGCAATATTGGCAAGCCATCCTGATGGAAAGGCTGCCATTGGCTCTGCAGAGGCGGTGCCTGTTTTGGTAGAGTTTATTGAGACTGGATCTCCAAGGAACAAAGAGAATGCAGCTGCTGTCTTAGTGCACCTTTGTTCTGGAGATCAACAGTATATAGCTCAGGCCCAGAAGGAAGGGGTGATGGGTCCACTGTTGCAATTAGCTCAAGATGGCACAGACAGAGGCAAAAGAAAGGCTGCACAATTGCTAGAGCGTATTAACAGGTTCAATGAGCAGCAGCAGGACGTTCAATCTCACAACCAGGATACGACTCTGCCTTCTACTACTAACCTTGATGATAGCTGA 1983 0.4589 MEVEKEGTDRAERLIELVNEISAISEYRWAVKKEYCNLARRLKLLSPLFEEIRDSKERIPEETSKALISFNKAMESAKELLRFGSQGSKIYMVLERDQVMNKFHEVTAQLEQALGGISYDKLDISDEVKEQVDLVLAQFRRAKGRVDEVPDVELYGDLLSLYNKSNDAATDPTVLKSLAEKLQLIGIADLTQESLALHEMVVASGGDPGASIEKMSMLLKKIKDYAQIENLEVDDNVGGNTLSSSCCKKGAIEKNYQPPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEEGHGTCPKTQQTLSSTVLTPNYVLRSLIAQWCEANGIEPPTRPSSSEPSKSVSACSTAEQSKIENLLRKLTSGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLAGLLCMPDSRIQEHAVTALLNLSICENNKGSIISSGAVPGIVHVLKKGSMEARENAAATLFSLSVVDENKVTIGASGAIPPLVTLLNEGTQRGKKDAATALFNLCIYQGNKGRAVRAGIIPILMRLLTEPGGGMVDEALAISAILASHPDGKAAIGSAEAVPVLVEFIETGSPRNKENAAAVLVHLCSGDQQYIAQAQKEGVMGPLLQLAQDGTDRGKRKAAQLLERINRFNEQQQDVQSHNQDTTLPSTTNLDDS 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15133g00002 660 FunFam RING-type E3 ubiquitin transferase 8 120 - -
Mupr15133g00002 660 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 440 482 IPR000225 GO:0005515
Mupr15133g00002 660 SMART arm_5 552 592 IPR000225 GO:0005515
Mupr15133g00002 660 SMART arm_5 429 469 IPR000225 GO:0005515
Mupr15133g00002 660 SMART arm_5 594 634 IPR000225 GO:0005515
Mupr15133g00002 660 SMART arm_5 388 428 IPR000225 GO:0005515
Mupr15133g00002 660 SMART arm_5 470 510 IPR000225 GO:0005515
Mupr15133g00002 660 CDD MLKL_NTD 14 140 - -
Mupr15133g00002 660 Gene3D - 347 537 IPR011989 -
Mupr15133g00002 660 Gene3D - 8 119 IPR036537 GO:0007166
Mupr15133g00002 660 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 399 441 IPR000225 GO:0005515
Mupr15133g00002 660 Gene3D - 538 651 IPR011989 -
Mupr15133g00002 660 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 261 334 IPR013083 -
Mupr15133g00002 660 Pfam U-box domain 261 331 IPR003613 GO:0004842|GO:0016567
Mupr15133g00002 660 FunFam RING-type E3 ubiquitin transferase 344 495 - -
Mupr15133g00002 660 FunFam RING-type E3 ubiquitin transferase 535 651 - -
Mupr15133g00002 660 FunFam RING-type E3 ubiquitin transferase 261 334 - -
Mupr15133g00002 660 MobiDBLite consensus disorder prediction 637 660 - -
Mupr15133g00002 660 PANTHER U BOX DOMAIN-CONTAINING 32 632 - -
Mupr15133g00002 660 ProSiteProfiles U-box domain profile. 260 334 IPR003613 GO:0004842|GO:0016567
Mupr15133g00002 660 CDD RING-Ubox_PUB 262 314 IPR045210 -
Mupr15133g00002 660 SMART Ubox_2 264 327 IPR003613 GO:0004842|GO:0016567
Mupr15133g00002 660 SUPERFAMILY RING/U-box 260 336 - -
Mupr15133g00002 660 SUPERFAMILY ARM repeat 359 642 IPR016024 -
Mupr15133g00002 660 Pfam Armadillo/beta-catenin-like repeat 471 509 IPR000225 GO:0005515
Mupr15133g00002 660 Pfam Armadillo/beta-catenin-like repeat 388 427 IPR000225 GO:0005515
Mupr15133g00002 660 Pfam Armadillo/beta-catenin-like repeat 553 592 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15133g00002 Mupr-Chr15133 19069 22843 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15133g00002 3 641 U-box Gene Family AT3G46510 70.963 0.0 905
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15133g00002 - - gmx:100812160 1008.44