Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15127g00003 ATGATGGGTGCGCCAAGGTTCCCCATTCGTGCTAATATATTAAAGCACCTATTGCTCGTAGAGTGGTTGCAGTTCAAGCTTTCAACATCCAAAACACCAGACAGTTTTGGTTTTGAAGCTGAAGGAGTAGTCACCAAAATGGGGAGAGCTCCATGCTGCGAGAAAATGGGGTTGAAGAGAGGGCCATGGACTCCAGAAGAAGATCTTATTCTCATCAATTACATCAACACTTATGGCCATGCTAATTGGCGTGCACTCCCCAAACAAGCTGGGCTGTTAAGGTGTGGAAAGAGTTGTAGACTTCGGTGGATAAATTATCTGAGGCCGGACATCAAACGAGGCAACTTTACCAGAGAAGAAGAGGATGCTATAATCAGTTTGCATGAAATGTTGGGAAACAGATGGTCGGCTATTGCAGCCAAGTTACCAGGGAGAACAGACAACGAGATAAAAAACGTATGGCACACGCACTTGAAGAAGAGGCTGCCAGAAAATTACCAACAAAGCCACCACAACCCAAAACGAAGCAAAAAACAAGCCAAGTTGGATGTGGACTCCTCCAAACCCAACCGAGACGCCAAACTAGAACAAGACCCCGTGAATTTTCCCATTCATGCATCCAACACAGAGGACATGCCACAATGTTCTAGCGACACGTCCTCTCTCACCACTAGTGACAATAATAGTAGCATTAATAATCTTGACATGTCCTTAAATGTTAATAACACTGACACGCCAGAGAATAACCTTGCATTGGACGAGGATTTCTGGTCGGAAGTGTTGTCATCTGATAATTCCGGCGAGACAAGTGGATTTCCGGACATTGGTGTTACCTATGATCGGTTTCAACCAATGTCATCTCCTCTAGTAACCGAAGAAGGGGTCCTTATAGATGCTAGTTCGTCAAGTATGTGCGACGGCATGGACTTTTGGAGCCATGTTTACGCCAGAGCTGAGGAATTCACCCAGTTACTGGAATTGTGA 984 0.4522 MMGAPRFPIRANILKHLLLVEWLQFKLSTSKTPDSFGFEAEGVVTKMGRAPCCEKMGLKRGPWTPEEDLILINYINTYGHANWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDAIISLHEMLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLPENYQQSHHNPKRSKKQAKLDVDSSKPNRDAKLEQDPVNFPIHASNTEDMPQCSSDTSSLTTSDNNSSINNLDMSLNVNNTDTPENNLALDEDFWSEVLSSDNSGETSGFPDIGVTYDRFQPMSSPLVTEEGVLIDASSSSMCDGMDFWSHVYARAEEFTQLLEL 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15127g00003 327 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 47 269 - -
Mupr15127g00003 327 FunFam MYB-related transcription factor 59 112 - -
Mupr15127g00003 327 MobiDBLite consensus disorder prediction 178 195 - -
Mupr15127g00003 327 SUPERFAMILY Homeodomain-like 56 154 IPR009057 -
Mupr15127g00003 327 Pfam Myb-like DNA-binding domain 60 107 IPR001005 -
Mupr15127g00003 327 Pfam Myb-like DNA-binding domain 113 158 IPR001005 -
Mupr15127g00003 327 CDD SANT 115 158 IPR001005 -
Mupr15127g00003 327 FunFam Transcription factor MYB15 114 187 - -
Mupr15127g00003 327 Gene3D - 60 112 - -
Mupr15127g00003 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 108 162 IPR017930 -
Mupr15127g00003 327 CDD SANT 62 107 IPR001005 -
Mupr15127g00003 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 107 IPR017930 -
Mupr15127g00003 327 MobiDBLite consensus disorder prediction 202 239 - -
Mupr15127g00003 327 ProSiteProfiles Myb-like domain profile. 55 107 IPR001005 -
Mupr15127g00003 327 SMART sant 59 109 IPR001005 -
Mupr15127g00003 327 SMART sant 112 160 IPR001005 -
Mupr15127g00003 327 Gene3D - 115 188 - -
Mupr15127g00003 327 ProSiteProfiles Myb-like domain profile. 108 158 IPR001005 -
Mupr15127g00003 327 MobiDBLite consensus disorder prediction 162 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15127g00003 Mupr-Chr15127 15045 17093 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15127g00003 47 327 MYB Transcription Factor Family AT2G31180 52.431 2.44e-82 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr15127g00003 Myb_DNA-binding 3.8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15127g00003 K09422 - gmx:100775603 448.358