Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15118g00001 ATGGTGTCTGACGCGAGCAAGAAGAAGGCCGCACAGAAGAAGGCGGCGGCGGCGGCCAAGAGAGGTGGCAAAGCGGCGGTTGCTTCGTCCAAAACGACGTCGGAGAAGGCGGCCGACAAGCTCGCCGACGGAATTGGGGACATTCAGATTTCCGATCGGACCTGCACCGGTGTCCTCTGCTCGCATCCTCTTTCAAGGGATATTAGGATAGAATCTCTGTCAGTTACTTTCCACGGACATGATTTGATAGTTGATTCCGAATTGGAACTAAATTATGGAAGACGTTATGGCTTACTTGGCTTAAATGGATGCGGAAAATCTACCTTGCTTACGGCAATAGGTTGCCGAGAGCTACCTATTCCAGATCATATGGATATTTTTCACCTTACCAGAGAAATTGAAGCCTCTGACATGTCTGCATTGGAGGCTGTCATAAGCTGTGATGAGGAAAGGTTGAAATTGGAGAAAGAAGCTGAAGCTTTGTCAGCTCAGGATGATGGGGGTGGTGAAACTCTCGAACGTATTTATGAACGATTGGAAGCCATGGATGCATCAACTGCAGAAAAGCGTGCTGCTGAAATTTTATTTGGTCTTGGTTTCAACAAGCAGATGCAGGCAAAGAAGACACGTGATTTTTCTGGTGGCTGGAGAATGAGGATTGCTTTAGCACGTGCTCTATTTATGAACCCAACCATTCTTTTACTTGATGAACCAACCAATCACCTCGATTTAGAAGCTTGCGTGTGGCTGGAAGAGAATTTGAAGAAGTTTGACCGTATTCTGGTTGTGGTTTCACACTCCCAGGATTTCCTTAATGGTGTCTGCACAAATATCATCCACATGCAAAACAAAACGCTGAAGCTCTATACTGGGAATTATGATCAGTATGTTCAGACGCGTGCCGAACTGGAAGAGAACCAGATGAAGCAGTACAAATGGGAGCAGGAGCAAATTTCCTCAATGAAGGAATACATTGCCCGATTTGGTCACGGATCAGCAAAACTAGCTCGGCAAGCCCAGAGTAAAGAGAAAACTCTTGCAAAAATGGAGCGGAGTGGACTCGCAGAGAAGGTGGTAAGAGACAAAGTGTTGGTATTCCGATTTGTTGATGTGGGAAAACTTCCCCCGCCTGTCCTCCAGTTCGTTGAGGTGACATTTGGTTACACGCCTGATAATCTGATCTATAAGAGCCTTGACTTTGGGGTTGATTTAGACTCTAGAATTGCTCTGGTTGGACCCAATGGAGCTGGGAAGAGTACATTGCTGAAGCTAATGACTGGTGAATTGGAACCTACAGACGGCATGGTTCGACGCCACAATCACCTTCGAATTGCACAATTTCACCAGCACTTGGCTGAAAAGCTAGACTTGGAAATGTCTGCTCTCCAGTATATGATAAAAGAATACCCTGGAAATGAGGAGGAGAGAATGAGAGCAGCTATTGGGAAATTTGGACTGTCAGGTAAAGCGCAGGTGATGCCTATGAAGAATTTATCTGATGGGCAGAGGAGCCGCGTCATATTCGCATGGTTAGCTTATAGACAACCTCACTTGTTACTTCTGGATGAACCAACTAATCATTTGGATATTGAAACAATTGACTCGTTGGCTGAGGCATTGAATGAATGGGATGGTGGCATGGTGCTTGTTAGTCACGATTTTAGGCTCATAAATCAGGTGGCCCATGAGATATGGGTGTGCGCTGATCAAACTGTGACCAGATGGGAAGGTGACATTATGGATTTCAAGGAGCACCTAAGGTCAAACGCAGGGGTGGGTGTTGCTCCTCGGCTGGATTTCCCCTTGGCGACGATAACA 1818 0.4626 MVSDASKKKAAQKKAAAAAKRGGKAAVASSKTTSEKAADKLADGIGDIQISDRTCTGVLCSHPLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGCRELPIPDHMDIFHLTREIEASDMSALEAVISCDEERLKLEKEAEALSAQDDGGGETLERIYERLEAMDASTAEKRAAEILFGLGFNKQMQAKKTRDFSGGWRMRIALARALFMNPTILLLDEPTNHLDLEACVWLEENLKKFDRILVVVSHSQDFLNGVCTNIIHMQNKTLKLYTGNYDQYVQTRAELEENQMKQYKWEQEQISSMKEYIARFGHGSAKLARQAQSKEKTLAKMERSGLAEKVVRDKVLVFRFVDVGKLPPPVLQFVEVTFGYTPDNLIYKSLDFGVDLDSRIALVGPNGAGKSTLLKLMTGELEPTDGMVRRHNHLRIAQFHQHLAEKLDLEMSALQYMIKEYPGNEEERMRAAIGKFGLSGKAQVMPMKNLSDGQRSRVIFAWLAYRQPHLLLLDEPTNHLDIETIDSLAEALNEWDGGMVLVSHDFRLINQVAHEIWVCADQTVTRWEGDIMDFKEHLRSNAGVGVAPRLDFPLATIT 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15118g00001 606 CDD ABCF_EF-3 68 285 - -
Mupr15118g00001 606 Coils Coil 286 306 - -
Mupr15118g00001 606 Gene3D - 343 591 IPR027417 -
Mupr15118g00001 606 Pfam ABC transporter 396 526 IPR003439 GO:0005524
Mupr15118g00001 606 Pfam ABC transporter 86 240 IPR003439 GO:0005524
Mupr15118g00001 606 FunFam ATP-binding cassette sub-family F member 3 339 592 - -
Mupr15118g00001 606 Pfam ABC transporter 279 354 IPR032781 -
Mupr15118g00001 606 Coils Coil 144 164 - -
Mupr15118g00001 606 SMART AAA_5 404 604 IPR003593 GO:0016887
Mupr15118g00001 606 SMART AAA_5 92 294 IPR003593 GO:0016887
Mupr15118g00001 606 Gene3D - 68 332 IPR027417 -
Mupr15118g00001 606 CDD ABCF_EF-3 379 571 - -
Mupr15118g00001 606 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 313 IPR027417 -
Mupr15118g00001 606 FunFam Abc transporter f family member 1 68 332 - -
Mupr15118g00001 606 Coils Coil 332 352 - -
Mupr15118g00001 606 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 36 589 - -
Mupr15118g00001 606 ProSitePatterns ABC transporters family signature. 212 226 IPR017871 GO:0005524|GO:0016887
Mupr15118g00001 606 MobiDBLite consensus disorder prediction 1 33 - -
Mupr15118g00001 606 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 363 573 IPR027417 -
Mupr15118g00001 606 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 379 601 IPR003439 GO:0005524
Mupr15118g00001 606 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 68 308 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15118g00001 Mupr-Chr15118 3998 7923 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15118g00001 88 266 Calmodulin-binding Proteins AT2G36910 28.415 5.19e-08 54.3