Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1510g00002 ATGGGAGGTACCTCACCTTGTGCTTCTTGCAAGTTGTTGAGACGCCGTTGCTCCACAGAATGCATCTTTGCTCCTTACTTTCCTTCCGATGACCCCCGCAAGTTTGCCATTGTGCATAAGGTCTTTGGTGCTAGCAATGTCAGTAAGATGCTCCAGGAGCTTCCAGTTCATCAAAGAGCAGATGCTGTGAATAGTTTAGTTTATGAGGCAAATGCAAGAGTTAGAGACCCAGTTTATGGATGTGTTGGAACCATATCATACCTACAAAACCAGGTTTCACAATTGCAAATGCAGCTTGCAGTGGCTCAGGCAGAGATTTTGTGCATCCAGATGCAGCAAGAGACTACCTTAGCCACACAAGTAGACCAAGATGACAGATCACTGCTCCAATCTGTAAACAATAACTGCGAATTCCTTCCTCACTATCTTAGCTTTCCTTCATCTTCTTCCTCGTCTTCCAATGTATTCCAAGACCCTCATGAGCCTCTTAAGAGAGAGCCTTTTTGGACTTAA 513 0.4464 MGGTSPCASCKLLRRRCSTECIFAPYFPSDDPRKFAIVHKVFGASNVSKMLQELPVHQRADAVNSLVYEANARVRDPVYGCVGTISYLQNQVSQLQMQLAVAQAEILCIQMQQETTLATQVDQDDRSLLQSVNNNCEFLPHYLSFPSSSSSSSNVFQDPHEPLKREPFWT 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1510g00002 170 Coils Coil 85 105 - -
Mupr1510g00002 170 MobiDBLite consensus disorder prediction 150 170 - -
Mupr1510g00002 170 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Mupr1510g00002 170 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Mupr1510g00002 170 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1510g00002 Mupr-Chr1510 29324 30631 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1510g00002 3 170 AS2 family AT2G30130 64.550 1.33e-77 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mupr1510g00002 LOB 4.6e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1510g00002 - - gmx:100780073 286.189