Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15096g00002 ATGGCTATTCGTGTCACCTTCTCCTTCTCCGGCTATGTTGCCCAAAACCTCGTCTCCTCCGCCGGCGGGCGCGTCGCCAACACCCGATGCGTCCAAGAATGCTGGATCCGCTCTCGCCTCTTCGGCGCCGCTCAGAAGCCGGATCTCGATTCTTCCGCCGGCGGAGTCCGCAATCTCCACTCGGATTTCGCCAGGCCCAAGTCCAACTGCTGGGCCCAATCCAATTACTCCACCCTCGCCGGTGAGTTTATCGGCGACAGCTGCAAGAGCCCAATCATCTTGGGCCTGATTTCGATGCTGAAGTCAACGGCGGGTGTTTCCGGGTCATCCGCGGCGGCTATGGGTATTTTGGGTATTTCGCCGTTTAAAACCTCTTCGATGATTCCCTTCTTGTCGGGTTCGAAGCGGCTTCCTTGTAACGAGTCTGTTCCCGACACCACCTGGGAGGTCGATAAAGGTGGCACGCAACGCGTTGTTTCGAACGCGGAATCGAGTTTTGGAAAGACTAGTTGGCTTTCGCGGTTGCTGAACGTGTGTTCCGAAGACGCGAAGGCGGTCTTCACTGCCGTTACCGTTAGCTTTCTCTTCAAATCGTCCTTGGCTGAACCTAGATCAATTCCTTCCTCTTCTATGTACCCTACTCTTGAAGTCGGTGACCGTGTTTTAACCGAGAAGGTTTCGTTCCTCTTTAGAAAGCCTAATGTTTCGGATATTGTGATTTTTAAAGCGCCTCCTTGTCTGGAGGAGTTTGGTTTTAGTTCATCTGATGTATTTATAAAGAGGGTTGTGGCTAAGGCTGGGGACTCTGTTGAGGTTCGTGATGGTAAACTGTTGGTAAATGGTGCTGCTGAAGAAGAGGAATACGTTTTAGAGCCTCTTGCTTATGAGATGGATCCAATGGTTGTACCAGAAGGATATGTGTTTGTAATGGGAGACAATAGGAATAAAAGCTTTGATTCTCATAACTGGGGTCCCCTCCCAGTTGAGAATATTGTCGGTAGGTCCATGTTTCGCTACTGGCCTCCATCCAAAGTATCTGACACCGATACCCTTCGTAAGCTCCCACCTGGGAACAATCCTGTGGCTATGTCCCCAGAAGAACGATTAACTGGATCCACCTTGATTCTATTGAACGGTTTGGATACA 1146 0.5061 MAIRVTFSFSGYVAQNLVSSAGGRVANTRCVQECWIRSRLFGAAQKPDLDSSAGGVRNLHSDFARPKSNCWAQSNYSTLAGEFIGDSCKSPIILGLISMLKSTAGVSGSSAAAMGILGISPFKTSSMIPFLSGSKRLPCNESVPDTTWEVDKGGTQRVVSNAESSFGKTSWLSRLLNVCSEDAKAVFTAVTVSFLFKSSLAEPRSIPSSSMYPTLEVGDRVLTEKVSFLFRKPNVSDIVIFKAPPCLEEFGFSSSDVFIKRVVAKAGDSVEVRDGKLLVNGAAEEEEYVLEPLAYEMDPMVVPEGYVFVMGDNRNKSFDSHNWGPLPVENIVGRSMFRYWPPSKVSDTDTLRKLPPGNNPVAMSPEERLTGSTLILLNGLDT 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15096g00002 382 ProSitePatterns Signal peptidases I signature 3. 307 320 IPR019758 GO:0004252|GO:0016020
Mupr15096g00002 382 Gene3D Umud Fragment, subunit A 196 353 - -
Mupr15096g00002 382 CDD S26_SPase_I 202 334 IPR019533 GO:0004252|GO:0006465
Mupr15096g00002 382 ProSitePatterns Signal peptidases I serine active site. 208 215 IPR019756 GO:0004252|GO:0016020
Mupr15096g00002 382 FunFam Peptidase/ serine-type peptidase 208 339 - -
Mupr15096g00002 382 NCBIfam signal peptidase I 185 341 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mupr15096g00002 382 PANTHER SIGNAL PEPTIDASE I 148 347 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mupr15096g00002 382 SUPERFAMILY LexA/Signal peptidase 200 345 IPR036286 -
Mupr15096g00002 382 PRINTS Bacterial leader peptidase 1 (S26A) family signature 302 321 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mupr15096g00002 382 PRINTS Bacterial leader peptidase 1 (S26A) family signature 199 215 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mupr15096g00002 382 PRINTS Bacterial leader peptidase 1 (S26A) family signature 258 270 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mupr15096g00002 382 Pfam Signal peptidase, peptidase S26 183 340 IPR019533 GO:0004252|GO:0006465
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15096g00002 Mupr-Chr15096 8327 10652 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15096g00002 211 341 MADS-box Gene Family AT1G29960 31.818 7.13e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15096g00002 K03100 - gmx:100817525 623.239