Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15082g00001 ATGGATAGGATTCAGGAGGCAGATGCAAATAATACATCTCAGCGTTCCTCGTCTTCAGTTGTTGCTTTGGCGATCAAGGGCAACAAGAAGAGCAAATATGTGGTACAGTGGGCACTTAATAAGTTTGTTCCTGAGGGAATGATTATCTTCAAGCTGATTCATGTCCATGCTGGTATAAAAGGCGTTCCAACACCAATGGGAAATGTGATCCCTCTTTCACAAGTGCGTAATGATGTAGCGACTGCATTCAGAAAGGAAGTGGAGTGGCAAACAAATCAAATGCTTCAACCTTTCAAGAGAATGTGTGAGCAAAGAAAGGTGCATGTAGATGTTGTAGTGATTGAATCAGATGACGTGGCAGTTGCAGTAGCAGAGGAAGTAGCTAAGAGTGCTATAACCAAACTTGTTGTTGGAGCTTCATCTCGTGGAATATTTAAAAGTAAACAGAAGGGTATGTCTGCGAAAATATCAGTAACCACTCCAAGATTTTGTACAATTTATGTTATTTCGAAGGGAAAATTGTCCATTCGGCCATCAGATATGCCGATCACTGGAAGCATTATAGATGATGGTAGTGAAACCAGTTTGTCCTCCAGCAGATCATCAAACTACGCTTCCACCTCTCAGACAGAATCTGCCTCAGTTTCATCATATGCTGGTTTACACTCCTCTTCCCTAGCAACACAACGATTTCAAGCTCTTTCAAGTATAAATCATGCCCTTCTAAGCACAACTTCTAGTTTAATTGAAAGTAACCATTCTAGAGGCCAATCTCTAGATATTGGGAGAGAAAATACTGCTACAAGTTCTGCCAGAAACTCAGACATTGATCATGCTTTAAGTCGGGTCTCTAGTTGCAAAAGCTTTCTTTCAGATACTGAATCCTGGATTCATGATCAAAATTCTGTCAAGGATGGGCCGTTAGCAACTTCACTTCCATCACCTAATAGGCAGGCAAAATTTAACCTTGAGCTGGAAAAGTTGAGAATTGAACTAAGACATGCCCAAGGACTGCATGCAGTAGCTCAAAGTGAGAAAATTGAAGCATCCCGAAAGCTGAATGACCTAAGCAAGAGGCGATCAGAAGAAACTCAGAAAATGAAGGAGATTATTGCTAAGGAGGAGAAGGCAAAAGAGTTAGTAAAACAAGAAAGAGATAAATATCAAGATGCATCAAGAGAAGCTGCATATTTGAAAGAATGTGCTGAAAGAGAAGCTTCAGAAAGGAAAGAAACGGAGTTGAAAGCTATTCGTGCTACAAAAGAGAAAGAAAAGCTGGAAGATGCTCTTAGTGGTTCCATGCCCCAGTACCGGAAGTTTACATGGGATGAAATAGTCTCAGCTACTTCATCTTTCTCTGAAGATCTGAGAATTGGAATGGGAGCATATGGAATAGTGTATAAGTGCATTTTGTATCACACAACTGTTGCTGTTAAAGTTCTCAACACTAATGAAAACCGCAAAAGCAAGCAATTCCAGCAGGAGTTAGAGATATTGAGCAGAATTCATCATCCAAATTTGCTTCTTCTTCTTGGTGCATGTCCTGATCATGGATGCCTAGTGTATGAATATATGGAGCATGGTAACTTGGAGGAAAGACTACTAAGAAAAAACAATACTTCTCCAATCCCATGGTTTGAGAGGTTTCGAATAGCTTGGGAGGTTGCATCCGCTCTTGCCTTTCTTCATAGCTCAAAGCCAGAACCTATCATTCATCGTGATTTGAAACCGGCAAACATCTTGCTTGGTCGTAACCTTGTCAGCAAAATTGGTGACATTGGCCTTTCTACAATGCTCCATTCAGATAATTTGTCTACCATGTATAAGGACACAGGGCCAGTTGGGACACTATCCTACATAGATCCTGAGTATCAAAGGACAGGGTTAATATCTCCAAAATCTGACGTTTATGCTTTTGGAATGGTGATCTTACAGTTATTGACAGCAAAACCAGCAATAGCACTTGCTCATAAAGTTGAAACAGCAATTGATGATGGGAATTTAACAAATATATTGGATCCAGAGGCAGGGGCTTGGCCATTTCAAGAGACACTAGAATTGGCTCAGCTGGGACTTAGCTGTGCAGAACTTAGGCGTAGAGACCGGCCGGATTTACAAGATCATGTTCTTCCAACACTAGAGAGATTGAAAGAAGTTGCTGATAGGGCCCAACATTCTGCTTCAACTGTTACTATTAAATCCAAACCTCCTAATCACTTTATCTGTCCAATACTTCAGGATGTGATGGATGATCCTTGTGTTGCTGCGGATGGATATACATATGATCGTAAAGCAATTGAAAAGTGGCTTGAAGAGAACGACAAATCACCAATGACAAACATGGCTTTACCTCATAAGCATTTAATTCCTAATTACACACTTCTGTCAGCAATTTTGGAGTGGAAATCCAGAGAATCATGA 2421 0.4056 MDRIQEADANNTSQRSSSSVVALAIKGNKKSKYVVQWALNKFVPEGMIIFKLIHVHAGIKGVPTPMGNVIPLSQVRNDVATAFRKEVEWQTNQMLQPFKRMCEQRKVHVDVVVIESDDVAVAVAEEVAKSAITKLVVGASSRGIFKSKQKGMSAKISVTTPRFCTIYVISKGKLSIRPSDMPITGSIIDDGSETSLSSSRSSNYASTSQTESASVSSYAGLHSSSLATQRFQALSSINHALLSTTSSLIESNHSRGQSLDIGRENTATSSARNSDIDHALSRVSSCKSFLSDTESWIHDQNSVKDGPLATSLPSPNRQAKFNLELEKLRIELRHAQGLHAVAQSEKIEASRKLNDLSKRRSEETQKMKEIIAKEEKAKELVKQERDKYQDASREAAYLKECAEREASERKETELKAIRATKEKEKLEDALSGSMPQYRKFTWDEIVSATSSFSEDLRIGMGAYGIVYKCILYHTTVAVKVLNTNENRKSKQFQQELEILSRIHHPNLLLLLGACPDHGCLVYEYMEHGNLEERLLRKNNTSPIPWFERFRIAWEVASALAFLHSSKPEPIIHRDLKPANILLGRNLVSKIGDIGLSTMLHSDNLSTMYKDTGPVGTLSYIDPEYQRTGLISPKSDVYAFGMVILQLLTAKPAIALAHKVETAIDDGNLTNILDPEAGAWPFQETLELAQLGLSCAELRRRDRPDLQDHVLPTLERLKEVADRAQHSASTVTIKSKPPNHFICPILQDVMDDPCVAADGYTYDRKAIEKWLEENDKSPMTNMALPHKHLIPNYTLLSAILEWKSRES 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15082g00001 806 SMART serkin_6 452 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr15082g00001 806 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 23 147 - -
Mupr15082g00001 806 SMART Ubox_2 739 801 IPR003613 GO:0004842|GO:0016567
Mupr15082g00001 806 Coils Coil 325 394 - -
Mupr15082g00001 806 Coils Coil 407 429 - -
Mupr15082g00001 806 Gene3D Transferase(Phosphotransferase) domain 1 525 735 - -
Mupr15082g00001 806 CDD RING-Ubox_WDSUB1-like 737 791 - -
Mupr15082g00001 806 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 736 806 IPR013083 -
Mupr15082g00001 806 PANTHER OS02G0152300 PROTEIN 20 800 - -
Mupr15082g00001 806 Pfam U-box domain 737 804 IPR003613 GO:0004842|GO:0016567
Mupr15082g00001 806 Gene3D Phosphorylase Kinase; domain 1 421 524 - -
Mupr15082g00001 806 SUPERFAMILY RING/U-box 734 804 - -
Mupr15082g00001 806 SUPERFAMILY Protein kinase-like (PK-like) 434 707 IPR011009 -
Mupr15082g00001 806 ProSitePatterns Serine/Threonine protein kinases active-site signature. 570 582 IPR008271 GO:0004672|GO:0006468
Mupr15082g00001 806 ProSitePatterns Protein kinases ATP-binding region signature. 458 479 IPR017441 GO:0005524
Mupr15082g00001 806 ProSiteProfiles U-box domain profile. 735 806 IPR003613 GO:0004842|GO:0016567
Mupr15082g00001 806 Gene3D HUPs 10 151 IPR014729 -
Mupr15082g00001 806 CDD STK_N 20 172 - -
Mupr15082g00001 806 Pfam Protein tyrosine and serine/threonine kinase 457 707 IPR001245 GO:0004672|GO:0006468
Mupr15082g00001 806 ProSiteProfiles Protein kinase domain profile. 452 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15082g00001 Mupr-Chr15082 2287 9763 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15082g00001 18 803 U-box Gene Family AT4G25160 52.670 0.0 843
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mupr15082g00001 PK_Tyr_Ser-Thr 7.6e-41 CL0016