Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15058g00004 TCAAAGAGAAAAAGGGCTGCTCTGAATGTAGAAAATTCAGAAACTTTACCTACAGGCCAAGGAATAACTAATAGCAAGGTATCTCTTTATCACTGTAATTATTGTAACAAAGATATTTCGGGGAAGATTCGCATAAAGTGTGTTGTGTGTCAAGATTTTGACCTCTGCATAGAGTGCTTCTCTGTTGGTGCTGAGGTGAAACCTCACAAATGCAATCATCCATATCGGATTATGGATAATCTATCTTTTCCACTTATATGTCCAGATTGGAATACAGATGAAGAGATGTTACTTCTAGAGGGCATTGAAATGTATGGATTTGGGAATTGGAATGAAGTTGCAGAATACGTTGGAACAAAAAGCAAGTCTCAATGTATTGACCACTATAATGCTGTGTATATGAATTCGCCATGTTTTCCTCTCCCTGATTTGTCTCATGTCATGGGGAAGAGCAGAGAGGAACTCTTTGCCATGGCGAAGGGACATGAAGTCAAGAAAGAATTTTCTCCAACTGCAGAGCTTACTCTGAAAGAAGAACCTCCCTTCTCTGATGGAATAAAGTACGGTTCACCCGTTAGCTGTGATTATTTGAAT 594 0.3906 SKRKRAALNVENSETLPTGQGITNSKVSLYHCNYCNKDISGKIRIKCVVCQDFDLCIECFSVGAEVKPHKCNHPYRIMDNLSFPLICPDWNTDEEMLLLEGIEMYGFGNWNEVAEYVGTKSKSQCIDHYNAVYMNSPCFPLPDLSHVMGKSREELFAMAKGHEVKKEFSPTAELTLKEEPPFSDGIKYGSPVSCDYLN 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15058g00004 198 SMART zz_5 26 71 IPR000433 GO:0008270
Mupr15058g00004 198 ProSitePatterns Zinc finger ZZ-type signature. 32 59 IPR000433 GO:0008270
Mupr15058g00004 198 Pfam Myb-like DNA-binding domain 89 130 IPR001005 -
Mupr15058g00004 198 CDD ZZ_ADA2 30 78 IPR041983 -
Mupr15058g00004 198 SUPERFAMILY RING/U-box 30 93 - -
Mupr15058g00004 198 ProSiteProfiles SANT domain profile. 85 137 IPR017884 -
Mupr15058g00004 198 CDD SANT 90 130 IPR001005 -
Mupr15058g00004 198 Pfam Zinc finger, ZZ type 30 70 IPR000433 GO:0008270
Mupr15058g00004 198 ProSiteProfiles Zinc finger ZZ-type profile. 27 83 IPR000433 GO:0008270
Mupr15058g00004 198 SMART sant 86 135 IPR001005 -
Mupr15058g00004 198 FunFam Transcriptional adapter 2 83 135 - -
Mupr15058g00004 198 Gene3D - 23 78 IPR043145 -
Mupr15058g00004 198 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 90 137 IPR017930 -
Mupr15058g00004 198 FunFam Transcriptional adapter 23 78 - -
Mupr15058g00004 198 SUPERFAMILY Homeodomain-like 82 136 IPR009057 -
Mupr15058g00004 198 ProSiteProfiles Myb-like domain profile. 90 133 IPR001005 -
Mupr15058g00004 198 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 29 183 - -
Mupr15058g00004 198 Gene3D - 88 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15058g00004 Mupr-Chr15058 3904 5917 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15058g00004 1 188 EF-hand Containing Proteins AT3G07740 55.838 1.46e-72 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mupr15058g00004 Myb_DNA-binding 7.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15058g00004 K11314 - gmx:100779424 374.4