Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15053g00001 GTTGATCGTTCAACAATTCTGTTACAGAATATTGGTTTGGTGGTTGCTTCGTTTATTATTGCCTTCATCTTGAACTGGAGAATAACACTTGTTGTCATAGCCACATATCCTTTGGTCATTAGTGGTCATATCAGTGAGAAACTTTTTATGAAAGGCTATGGTGGCAACTTGAGCAAAGCATATCTAAAAGCAAACATGCTGGCTGGGGAGGCTGTGAGCAATATACGCACTGTTGCCGCATTTTGTTCTGAAGAAAAGATCCTTGAACTTTATGCTAACGAGCTTGTTGATCCCTCCAAACGCTCTTTTCAACGAGGCCAAATTGCTGGCATATTCTATGGCATTTCCCAGTTCTTTATTTTCTCATCCTATGGCCTTGCCTTGTATGGATCTGTTTTGATGGAAAAGGAGCTTGCTAGCTTTAAATCAATTATGAAGGCATTTATGGTTTTGATAGTAACAGCACTGGCTATGGGGGAAACTTTGGCCCTGGCCCCAGACCTTTTGAAAGGGAATCAAATGGTTTCATCTGTTTTTGAAGTGATGGATAGAAAGTCAGGAATATCGGGTGAGGTTGGAGAAGAGTTGAAGACAGTGGAGGGAACTATTGAGCTCAAAAGAATCAATTTCAGCTACCCCTCAAGGCCAGATGTTATTATTTTCAAGGATTTCAATCTAAGAGTTCCTGCAGGGAAGAGTATTGCTTTAGTGGGGCAAAGTGGTTCTGGTAAAAGCTCTGTGATCTCCCTTATACTCAGGTTTTATGATCCAACATCTGGGAGGGTGTTAATTGATGGAAAAGACATCACAAAACTCAATGTGAAATCTCTCAGGAAACACATTGGCCTTGTGCAACAAGAACCGGCTCTATTTGCAACATCAATTTATGAAAATATACTTTATGGAAAGGAAGGTGCCTCTGACTCAGAAGTGATTGAAGCAGCTAAGCTTGCCAATGCTCATACCTTTATCAGTGGTCTTCCTGAGGGTTACTCCACCAAAGTAGGTGAACGAGGAGTGCAACTATCTGGTGGCCAGAGACAAAGGGTGGCCATTGCAAGAGCAGTTTTAAAGAACCCTGAAATCTTGCTATTGGATGAAGCCACTAGTGCACTTGATGTGGAGTCAGAGCGTGTGGTGCAGCAGGCATTGGACAGATTAATGCAAAACAGAACAACAGTTATTGTGGCACATAGGCTATCCACTATAAGAAATACAGACCAAATCTCAGTTTTACAGGATGGGAAGATAATTGAGCAAGGGACTCATTCAGGTCTTATAGAGAATAAAAATGGAGCATACTTTAAATTAGTCAACCTTCAACAACAACAGCATCAACTATAG 1344 0.4122 VDRSTILLQNIGLVVASFIIAFILNWRITLVVIATYPLVISGHISEKLFMKGYGGNLSKAYLKANMLAGEAVSNIRTVAAFCSEEKILELYANELVDPSKRSFQRGQIAGIFYGISQFFIFSSYGLALYGSVLMEKELASFKSIMKAFMVLIVTALAMGETLALAPDLLKGNQMVSSVFEVMDRKSGISGEVGEELKTVEGTIELKRINFSYPSRPDVIIFKDFNLRVPAGKSIALVGQSGSGKSSVISLILRFYDPTSGRVLIDGKDITKLNVKSLRKHIGLVQQEPALFATSIYENILYGKEGASDSEVIEAAKLANAHTFISGLPEGYSTKVGERGVQLSGGQRQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALDRLMQNRTTVIVAHRLSTIRNTDQISVLQDGKIIEQGTHSGLIENKNGAYFKLVNLQQQQHQL 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15053g00001 447 SUPERFAMILY ABC transporter transmembrane region 6 184 IPR036640 GO:0005524|GO:0016020
Mupr15053g00001 447 FunFam ATP-binding cassette transporter, subfamily B, member 2, group MDR/PGP protein PpABCB2 58 196 - -
Mupr15053g00001 447 Gene3D - 193 442 IPR027417 -
Mupr15053g00001 447 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 3 437 IPR039421 -
Mupr15053g00001 447 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 203 439 IPR003439 GO:0005524
Mupr15053g00001 447 CDD ABC_MTABC3_MDL1_MDL2 203 441 - -
Mupr15053g00001 447 FunFam ABC transporter B family member 4 193 446 - -
Mupr15053g00001 447 ProSitePatterns ABC transporters family signature. 342 356 IPR017871 GO:0005524|GO:0016887
Mupr15053g00001 447 Pfam ABC transporter 222 370 IPR003439 GO:0005524
Mupr15053g00001 447 CDD ABC_6TM_Pgp_ABCB1_D2_like 6 188 - -
Mupr15053g00001 447 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 170 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr15053g00001 447 SMART AAA_5 230 402 IPR003593 GO:0016887
Mupr15053g00001 447 Gene3D ABC transporter type 1, transmembrane domain 2 444 IPR036640 GO:0005524|GO:0016020
Mupr15053g00001 447 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 197 441 IPR027417 -
Mupr15053g00001 447 Pfam ABC transporter transmembrane region 5 156 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15053g00001 Mupr-Chr15053 8725 10729 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15053g00001 7 446 Calmodulin-binding Proteins AT2G36910 47.085 2.57e-122 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15053g00001 K05658 - gmx:100819045 819.305