Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15004g00001 ATGGATCAGGTTTCTGCTGATAATAATTGTCTCAGGGCAATAGGAGAGTGCCAACCACTTGCTCCGGTGGATTTGCCACTTCCTCCTCCTACACAAGTGCATTCATCCAATGATGCAGAAACAGTGAAGTTTCCCTTTGATCTTAATGCTCAACTTGATGAGAAGGAGCCAATTTCTTGCTCCAAGGAAGCACGTGTCGAAGTTGGTGGCGCGTGTGAAACGACACCCGCCACTTCTGATGAAACTAAGCTCCCCAATTCTGCATCAGCCGACAACATTCGACCTTTACGTTTGTTTGGTTTCGATGTCTCTCCAGATGTTGTTCCTCCTACCAATGCTTTTGACAATGATAATGAAGACAGAGCCAGTGTTGTTGAGGGAGGATCTGGGTCTGACAACAGGAAGAGAAAGGGTGTGTTGGAGGAATGTGAGCAAGGGGGTGGCAGGGCTTTCCGTGGGGAAACAGTGGCAGTGGAAACTGAGAGTGAAAAGGTGACCATAATGGATGATGGTTATCGCTGGCGCAAGTATGGACAGAAGATTATTAAGGGAAACATATACCCTAGGGCCTACTACAAATGCACAAGTGGTAGGTGTGCCGTAAGGAAGCACGTGGAAAGGGATTCATTCAATCCAAAAAACGTGGTTACAACTTACGAGGGAAAACACAACCACGAAGCGCCACCTCCTAGGAACAACAACAAGAAACAGCGTGTGGATAAAGATGATGATGGCAGTGAAGAACTTGCTGCTGTTACTGCTAATGCTGTATCGGCTTTTGGAATACCTAGGAATGAGAATCTCAACGCCCCAAATCCTGCAGAACCTCAAGACCAAACTCTTGAACTTGGCAATGACACAAGCCCTGAATTTTCCAATATGTTTCTGAGTTTCATGAATAGTAACATGAATAATATTGGGTCTTCCTCCTCCACCCCACAAATGCAATATTCTCCCTTGAATAATACCAATACCATGCCCTACCTCTCCTATGGGCTTAACCGTAACCGATATGATGCCTCTCAACCTGGTCCTTCAAGGGTTTTTGAGTTTCCAATGTCTCCACCATTTAACATTCCTCCTTCTTCTGGAGGTTTTCCTCAGGCTAGGTTTAATTCTAATGGGTCAAGTTCAGTGTTCCCTTTCAGAGGTGCAAGAGAC 1161 0.4556 MDQVSADNNCLRAIGECQPLAPVDLPLPPPTQVHSSNDAETVKFPFDLNAQLDEKEPISCSKEARVEVGGACETTPATSDETKLPNSASADNIRPLRLFGFDVSPDVVPPTNAFDNDNEDRASVVEGGSGSDNRKRKGVLEECEQGGGRAFRGETVAVETESEKVTIMDDGYRWRKYGQKIIKGNIYPRAYYKCTSGRCAVRKHVERDSFNPKNVVTTYEGKHNHEAPPPRNNNKKQRVDKDDDGSEELAAVTANAVSAFGIPRNENLNAPNPAEPQDQTLELGNDTSPEFSNMFLSFMNSNMNNIGSSSSTPQMQYSPLNNTNTMPYLSYGLNRNRYDASQPGPSRVFEFPMSPPFNIPPSSGGFPQARFNSNGSSSVFPFRGARD 387
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mupr15004g00001 387 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 78 299 IPR044810 GO:0003700
Mupr15004g00001 387 FunFam WRKY transcription factor 156 229 - -
Mupr15004g00001 387 SUPERFAMILY WRKY DNA-binding domain 164 228 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr15004g00001 387 MobiDBLite consensus disorder prediction 365 380 - -
Mupr15004g00001 387 SMART WRKY_cls 168 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr15004g00001 387 MobiDBLite consensus disorder prediction 270 284 - -
Mupr15004g00001 387 MobiDBLite consensus disorder prediction 224 247 - -
Mupr15004g00001 387 Pfam WRKY DNA -binding domain 169 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr15004g00001 387 MobiDBLite consensus disorder prediction 262 284 - -
Mupr15004g00001 387 MobiDBLite consensus disorder prediction 353 387 - -
Mupr15004g00001 387 MobiDBLite consensus disorder prediction 111 137 - -
Mupr15004g00001 387 MobiDBLite consensus disorder prediction 219 247 - -
Mupr15004g00001 387 Gene3D WRKY domain 152 229 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr15004g00001 387 ProSiteProfiles WRKY domain profile. 163 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mupr15004g00001 Mupr-Chr15004 8473 11629 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15004g00001 108 328 WRKY Transcription Factor Family AT4G26640 37.247 9.54e-31 121
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mupr15004g00001 WRKY 7.7e-23 CL0274