Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1499g00005 ATGAATTCTCGGTGCTTCCTCCATCCACAAGACTCTAGCATGGTTCCACTTTCTTCAAATTCTTCAACAGGTGCTAGAAACAGACCTCCACGTGTCACCCCTCCTTCCTTTTTGGTTAGGATGGCCATGAGGATATCTAGAGCAAGATGGTTTACCCTTTTGAGAAGAGTTTTTCATTACCAAAATGGATCAAGGTCCAATCTTGGCTCCAACCCTTTCAATTCTAGGACTTGGATGATGCTGGAGTTTATTGCCTTGGTTGTCCAAATAACCATTACAACATTCACTTTGGCCATTTCCAAGAGGGAGAGACCTGTTTGGCCTATGAGGATTTGGATTTCTGGTTATGATATTGGTTGTGTTCTTAATCTGTTGCTACTTTATGGCCGCTACCGTCAAATTTATCTCACTCAACCAGATGCTCTCAGCCTTTCTGATATGGAACAGCAGAGAAACAATGAAGAAACCAGGATGTCGCACTTGATGAATAAATGCCAGACTTCACTTGAGCTTTTCTTTGCCATATGGTTTGTGATGGGCAATGTTTGGGTTTTTGACTCACGTTTTGGATCTTTTCATCAAGCTCCAAAACTCCATGTGCTCTGCATCACTCTTCTTGCTTGGAATGCAATCTGCTACTCTTTCCCTTTCCTATTGTTTTTGCTGTTATGTTGCTGTGTGCCACTAATTAGCACCCTCCTCGGCTACAACATGAATGTGGCCTCTTCTGATAGAGGAGCTTCTGATGATCAAATTTCACAACTTTCAAGTTGGAGACATAATGAACCCCCCACCAACCTAGAGCATGGCAATGACTCTGAAGGCAGTGAAAAATTGATCAATGAAGACCCGGAATGTTGTATCTGCTTAGCCAAGTACAAAGACAAAGAGGAAGTTAGACAATTGCCCTGTTCCCATATGTTCCACCAAAAATGTGTGGATCAATGGCTAAAAATTACATCCTGCTGCCCTCTTTGCAAACAAGGATTAGAGAGGATGGAGAAAAATGTGGAGAAAAAGGACCCTTCCATGAATGCAACAAAGCTGAGTGGTAGAGAAATAAAAATACCGGGTTTGAACATGGATGATATAAAGCAGCAGTCACATATGCTAGTGTCACCAACAAGTGAAGCTTCAATGAGGAAATCTTCAACAGAAAGGTGGAATTGTCTGTGCTCTCCCACCACACATGCTGGCTCCTTCAGGTGCAGGCGCCACCGTGCTACTGGAATGACCCATGCTTCCTCTATTGGCTCCAATCTCTCTTCAATGACCTCTAAACACTCATTCCAAGCTCAA 1299 0.4303 MNSRCFLHPQDSSMVPLSSNSSTGARNRPPRVTPPSFLVRMAMRISRARWFTLLRRVFHYQNGSRSNLGSNPFNSRTWMMLEFIALVVQITITTFTLAISKRERPVWPMRIWISGYDIGCVLNLLLLYGRYRQIYLTQPDALSLSDMEQQRNNEETRMSHLMNKCQTSLELFFAIWFVMGNVWVFDSRFGSFHQAPKLHVLCITLLAWNAICYSFPFLLFLLLCCCVPLISTLLGYNMNVASSDRGASDDQISQLSSWRHNEPPTNLEHGNDSEGSEKLINEDPECCICLAKYKDKEEVRQLPCSHMFHQKCVDQWLKITSCCPLCKQGLERMEKNVEKKDPSMNATKLSGREIKIPGLNMDDIKQQSHMLVSPTSEASMRKSSTERWNCLCSPTTHAGSFRCRRHRATGMTHASSIGSNLSSMTSKHSFQAQ 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1499g00005 433 SMART ring_2 286 326 IPR001841 -
Mupr1499g00005 433 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 10 329 - -
Mupr1499g00005 433 MobiDBLite consensus disorder prediction 258 277 - -
Mupr1499g00005 433 MobiDBLite consensus disorder prediction 1 32 - -
Mupr1499g00005 433 MobiDBLite consensus disorder prediction 1 29 - -
Mupr1499g00005 433 Coils Coil 144 164 - -
Mupr1499g00005 433 ProSiteProfiles Zinc finger RING-type profile. 286 327 IPR001841 -
Mupr1499g00005 433 MobiDBLite consensus disorder prediction 414 433 - -
Mupr1499g00005 433 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 235 332 IPR013083 -
Mupr1499g00005 433 Pfam Ring finger domain 285 327 IPR001841 -
Mupr1499g00005 433 SUPERFAMILY RING/U-box 277 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1499g00005 Mupr-Chr1499 32844 37274 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1499g00005 29 330 C3H Transcription Factor Family AT4G26580 69.079 1.28e-147 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1499g00005 - - gmx:100813670 610.912