Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1498g00003 ATGGGAGAAGAAGCGGTTTGTGTGCAAGCATTAGAAGAAGGAAGGAAGGAAAACAATGAGGAATCAAGGACGGAACTGAAGCGTGACTACCACCAATGCGTTACTGATACTGAACCTCACTTGTCTCCCAACAAGAAACAAGCAAAAGAAGTTTCCAACGATGAAGTGCGCTCTGAGGTTTCTAACCCCAACGTTTCTGCAGCAGAGCATGCGCTAACCTTTCAAGATATCAGTAGCCAACCGATTGAATCTGGGAATGTTAACCATGCAGAGTGTGGGGAACTAACGTCTACTTGTTTAAGTTCTGATGAGACCTTGAGTGATGAAGCCGGTGATCAGATTAATAATAATAATAATACTTCTCGGAGTGATAAGGACACGAGTAGTGCTGCAATGACATCCTGCGTTGTGATGGAAATCCCCAAGCATGCGAGTTCATCTGGGATCAGGAAGATTACTTTTAAGTTCAGTAAAAAGAAGGAGGACTACGGTTACCAACATCCTGCTCCTGTGCACCGTTCTGCTCTCTTTACCGATGGCAATCGCAATGGCTTTCATGGGGATGATGAAGAATATTTAGCAAGGGATGATTGTAGTGGTGGGTTGTTAGAAAGCCCGTGTGGAATGGGATATGTTCGTGATGGAGATTTGGATTTGTACACTCACAATATGGAATTGAAAATGTCCAAGAAAGTAGTCCCCAACTGCTACCCGACAAATGTCAAAAAGCTGTTATCAACTGGCATCCTTGACGGGGCCATAGTGAAGTATATTTACAATCCTGGAAAGGTTGAGCTGCAGGGGATTATTGATGGTGGCGGATATTTGTGTAGCTGTTCAATGTGCAATTACTCTAGAGTTCTTAGTGCCTATGAGTTTGAGCAGCATGCTGGAGCCAAGACTAGACATCCAAATAATCATATATTCTTAGAAAATGGAAGACCGATATATAGTATTATACAGGAAATAAAAACTGCTCCACTCAGTATACTAGATGAGGTTATAAAGAATGTGGCTGGTTCATCTGTCAATGAGGAGTCATTCCAGGTTTGGAAAGAAAGTCTTCTACAAAGCAAGGGCAGGGTTCAGGCTTATAAAAATTACAACACCAAGCTCGTTGGCATGCCTCATACAAACATAAGGCCAAGCTCCTACACTTCTAACTCAGGTGTACAGCTGAAGAGAAGTGCTGATGGTTGCACTAAGAGAAGGGACAACGATTTACACAGGTTACTTTTTATGCCAAATGGACTCCCAGATGGTGCTGAGTTGGCTTACTATGTCAAAGGACAGAAATTACTTGGAGGTTACAAACAGGGAAATGGTATAGTCTGTGGTTGTTGTGATATAGAGATTAGCCCTTCACAGTTTGAAGCCCATGCTGGAATGGCTGCCAGGCGTCAACCTTATCGACACATATATACTTCCAATGGATTAACACTTCATGATATAGCTCTCTCATTGGCAAATGGTCAAAACCTTACCACGGGAGACAGTGATGATATGTGTGCAGTATGTGGAGATGGAGGAGATTTGATTCTGTGCAATGGATGCCCTAGGGCCTTCCATGCAGCCTGCTTGGGTTTACAGTGTGTGCCAGACAGTGGTTGGCAATGTCTAAATTGTAGAGACAATGCTGGTAATGGAAGAGAATCTTCTATTGTGAGGCCAATCATGATACGGTTGACACGGGTTGATAAAACACCAGAATTTGAAATGGGTGGATGTGTTGTTTGCAGGGAACATGATTTCAGTGTTGCTAAATTTGATGAGCGAACAGTAATAATTTGTGACCAGTGTGAGAAGGAGTATCATGTTGGCTGCTTACGGGACATTGGGCTATGTGAATTGGAAGAGCTGCCCAAGGATAAGTGGTTTTGTTGTGATGACTGCAATCGAATATATGTGGCTCTACAGAATTCAGTTTCTGCTGGAGCAGACATTATACCAGCTTCCTTGTCAGAACTACTGACCAGGAAGCATGAGGAGAAGGGATTATGTACCTATGGGGCCATGAATGATATCCAGTGGAGAATTTTAAGTGGAAAAAGTCGATATCCAGAACATTTACCATTGCTTTCACGAGCTGCTGCAATTTTCCGAGAGTGTTTTGATCCCATTGTTGCAATATCTGGTCGTGATCTGATTCCTGTTATGGTCTACGGGAGAAATATTTCTGGCCAAGAGTTTGGGGGAATGTATTGCATTGTTTTAATTGTGAATTCTGTTGTAGTATCTGCTGGGCTTCTTAGGATTTTTGGCCGTAATGTTGCTGAGCTTCCACTGGTCGCTACAAGCAGAGTACATCAAGGAAAAGGTTATTTTCAAGTATTGTTCTCTTGCATAGAGAGGTTGCTGACTTCTCTAAACGTAGAAAAGCTGGTGCTTCCTGCAGCAGGGGATGCTGAGTCAATTTGGACTAAGAAATTGGGCTTCCGAAAGATGAGCGAAGATCAGTTATCTAAATATCTTAGAGAGGTGCAGCTAACCCTCTTCAATAAAACTTCAATGCTGGAGAAGACAGTGCAGCGGGCTATAGAATGA 2544 0.4281 MGEEAVCVQALEEGRKENNEESRTELKRDYHQCVTDTEPHLSPNKKQAKEVSNDEVRSEVSNPNVSAAEHALTFQDISSQPIESGNVNHAECGELTSTCLSSDETLSDEAGDQINNNNNTSRSDKDTSSAAMTSCVVMEIPKHASSSGIRKITFKFSKKKEDYGYQHPAPVHRSALFTDGNRNGFHGDDEEYLARDDCSGGLLESPCGMGYVRDGDLDLYTHNMELKMSKKVVPNCYPTNVKKLLSTGILDGAIVKYIYNPGKVELQGIIDGGGYLCSCSMCNYSRVLSAYEFEQHAGAKTRHPNNHIFLENGRPIYSIIQEIKTAPLSILDEVIKNVAGSSVNEESFQVWKESLLQSKGRVQAYKNYNTKLVGMPHTNIRPSSYTSNSGVQLKRSADGCTKRRDNDLHRLLFMPNGLPDGAELAYYVKGQKLLGGYKQGNGIVCGCCDIEISPSQFEAHAGMAARRQPYRHIYTSNGLTLHDIALSLANGQNLTTGDSDDMCAVCGDGGDLILCNGCPRAFHAACLGLQCVPDSGWQCLNCRDNAGNGRESSIVRPIMIRLTRVDKTPEFEMGGCVVCREHDFSVAKFDERTVIICDQCEKEYHVGCLRDIGLCELEELPKDKWFCCDDCNRIYVALQNSVSAGADIIPASLSELLTRKHEEKGLCTYGAMNDIQWRILSGKSRYPEHLPLLSRAAAIFRECFDPIVAISGRDLIPVMVYGRNISGQEFGGMYCIVLIVNSVVVSAGLLRIFGRNVAELPLVATSRVHQGKGYFQVLFSCIERLLTSLNVEKLVLPAAGDAESIWTKKLGFRKMSEDQLSKYLREVQLTLFNKTSMLEKTVQRAIE 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1498g00003 847 CDD PHD1_AIRE 502 542 - -
Mupr1498g00003 847 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 490 561 IPR013083 -
Mupr1498g00003 847 SUPERFAMILY FYVE/PHD zinc finger 573 629 IPR011011 -
Mupr1498g00003 847 MobiDBLite consensus disorder prediction 12 57 - -
Mupr1498g00003 847 MobiDBLite consensus disorder prediction 12 35 - -
Mupr1498g00003 847 Pfam PHD-finger 502 543 IPR019787 -
Mupr1498g00003 847 ProSiteProfiles Zinc finger PHD-type profile. 500 545 IPR019787 -
Mupr1498g00003 847 FunFam PHD zinc finger protein 723 830 - -
Mupr1498g00003 847 ProSitePatterns Zinc finger PHD-type signature. 503 542 IPR019786 -
Mupr1498g00003 847 PANTHER AUTOIMMUNE REGULATOR 12 841 - -
Mupr1498g00003 847 MobiDBLite consensus disorder prediction 42 56 - -
Mupr1498g00003 847 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein 490 568 - -
Mupr1498g00003 847 Pfam Tify domain binding domain 268 322 IPR032308 -
Mupr1498g00003 847 Pfam Tify domain binding domain 436 485 IPR032308 -
Mupr1498g00003 847 Gene3D - 673 841 - -
Mupr1498g00003 847 MobiDBLite consensus disorder prediction 107 128 - -
Mupr1498g00003 847 SMART PHD_3 502 543 IPR001965 -
Mupr1498g00003 847 SMART PHD_3 575 632 IPR001965 -
Mupr1498g00003 847 ProSitePatterns Zinc finger PHD-type signature. 576 631 IPR019786 -
Mupr1498g00003 847 FunFam PHD zinc finger protein 574 634 - -
Mupr1498g00003 847 SUPERFAMILY FYVE/PHD zinc finger 498 545 IPR011011 -
Mupr1498g00003 847 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 726 817 IPR016181 -
Mupr1498g00003 847 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 572 634 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1498g00003 Mupr-Chr1498 16236 25967 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1498g00003 1 842 PHD Transcription Factor Family AT3G53680 51.620 0.0 880
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mupr1498g00003 TDBD 2e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1498g00003 - - gmx:100794242 1609.73