Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14986g00002 ATGGGGAATCAGAAGCAGAAGTGGACGCAGGACGAAGAAGACGCGCTTATTGCGGGAGTGGAAAAGCACGGCCCCGGTAAGTGGAAGAACATTCTCAAAGACCCGCAATTCGCCCCTTTCCTCACTTCTCGTTCCAACATCGACCTCAAGGATAAATGGCGAAATTTGAGCGTCAGTAACGGTTCTCAAGGCCCCAAAGACAAATCTAGGGTTCCCAAGCTCAAAGCTCTTCCTGCTCCTCCTGCTGCCACCGCCACTCCTCAAAACGCTGCTCCTGCTCCTCCAAACGCACCGTCTGATGTTGCTGTCTCGGGCCCTTCTCACAATGACCAAGATGTCAAAAACCCTCCAAGGTACAATGCAATGGTTTTTGAAGCTCTATCATCATTAAAAGATTGTAATGGATCTGACCTAAATGCCATTGTTAGTTTCATCGAGCAAAAACATCAAGTTCCCCAAAATTTCAGAAGGGCATTAAGTACAAGGTTAAGGAGGCTTGTTAGTCAAGGGAAACTTGAAAAGGTACAAAATTGTTACAAGATAAAAAAGGACACCCCCGTGGGGACAAAATCACCTTCACCAAAACAAAAGGATGTCCGGCCACCAGCACAACAACCAACACAACAACGGCAATCTCCAGCCTCTGTCTTTATGGCATCTAATGAGATAATAAAGGACGCAGCAGATACTGCAGCTTACAGAGTTGCTGAAGCTGAAAGTAAATCATATCTGGCTGCCGAAGCAGTAAAGGAGGCTGAAAAAATATCATTGCTGGTTCGCGTGGTGAACTTATCCTCTTGGCTTAACATGGTCAAAGTAAGGTTTATAAATAGATTCCGAGCCAATGTTGGTTTCTAA 858 0.4557 MGNQKQKWTQDEEDALIAGVEKHGPGKWKNILKDPQFAPFLTSRSNIDLKDKWRNLSVSNGSQGPKDKSRVPKLKALPAPPAATATPQNAAPAPPNAPSDVAVSGPSHNDQDVKNPPRYNAMVFEALSSLKDCNGSDLNAIVSFIEQKHQVPQNFRRALSTRLRRLVSQGKLEKVQNCYKIKKDTPVGTKSPSPKQKDVRPPAQQPTQQRQSPASVFMASNEIIKDAADTAAYRVAEAESKSYLAAEAVKEAEKISLLVRVVNLSSWLNMVKVRFINRFRANVGF 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14986g00002 285 FunFam Telomere repeat-binding factor 1 2 58 - -
Mupr14986g00002 285 Pfam Aluminium activated malate transporter 106 264 IPR020966 GO:0015743
Mupr14986g00002 285 Pfam linker histone H1 and H5 family 117 176 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mupr14986g00002 285 FunFam Telomere repeat-binding factor 1 8 87 - -
Mupr14986g00002 285 MobiDBLite consensus disorder prediction 198 215 - -
Mupr14986g00002 285 SUPERFAMILY "Winged helix" DNA-binding domain 115 195 IPR036390 -
Mupr14986g00002 285 MobiDBLite consensus disorder prediction 55 116 - -
Mupr14986g00002 285 MobiDBLite consensus disorder prediction 183 215 - -
Mupr14986g00002 285 ProSiteProfiles Myb-like domain profile. 1 57 IPR001005 -
Mupr14986g00002 285 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 115 183 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mupr14986g00002 285 SUPERFAMILY Homeodomain-like 2 58 IPR009057 -
Mupr14986g00002 285 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 62 IPR017930 -
Mupr14986g00002 285 SMART sant 4 59 IPR001005 -
Mupr14986g00002 285 Pfam Myb-like DNA-binding domain 5 56 IPR001005 -
Mupr14986g00002 285 CDD H15 117 195 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mupr14986g00002 285 SMART h15plus2 113 178 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mupr14986g00002 285 CDD SANT_TRF 6 56 - -
Mupr14986g00002 285 Gene3D - 2 58 - -
Mupr14986g00002 285 Gene3D - 112 200 IPR036388 -
Mupr14986g00002 285 PANTHER SINGLE MYB HISTONE 4 1 257 IPR044597 GO:0003691
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14986g00002 Mupr-Chr14986 14176 19528 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14986g00002 1 256 Single Myb Histone (SMH) Gene Family AT1G72740 51.154 3.75e-74 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mupr14986g00002 Linker_histone 2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14986g00002 K09422 - gmx:778177 361.303