LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr14983g00001	ATGGGATGCATTTGTGGCAAGTTTTCTCCCCCTCGCAAGGTTGAGAGGCCGAAACACCAAGTGAAGAAAAGGGGTTCTGGGGAGACTCAGCGACCGAAACTGAGTGTGCATGTTAATAAGAGGGATGAAAATGCTGCTGCTGTAGATGTTGTAGGAGGAGGAGAAAAGGAAAAACCGGTTGTTAAAAAAGAGAAGAGTAAGGTATGGGACCATATTGCTAACGAAAATAATACTAAAGACGATAAGAAGATGGCCAAATATGAATTTGTGGAGGGGTGGCCAAAGTGGTTAGTCGATAACATCCCCACAAATGTTTTGGCTAATATTGTTCCCAAGAGTGCAGATTCCTATCGAAAACTTGCCAAGATAGGACGTGGAACATACAGCAATGTGTACAAAGCAAGAGAAAAGGGCACGGGAAAGGTTGTTGCCTTGAAGAAGGTACGTTTTGACACGTCGGATTCTGAAAGCATCAAGTTTATGGCAAGAGAGATCATGATACTGCAGAAGCTGGATCATCCCAATGTCATCAAACTTAAAGGACTAGCAACATCCAGGATGCAGTATAGTCTTTATCTAGTTTTTGACTTCATGCACTCTGATCTGACCCGAATTATCTCCCGACCCGGGGAGAAACTTACCGAACCACAGATCAAGTGCTATATGCAGCAGCTGCTTTGTGGCCTGCAGCACTGTCACGAGAGGGGAGTTATGCACCGAGATATTAAGGCTTCTAACTTGTTAGTAGACAGAAAAGGGGTGCTGAAAATTGCGGATTTTGGGCTTGCAACTTCGATTGAAGCTGAAAGGCCTCTTACAAATAGAGTGGTGACACTTTGGTATAGAGCTCCAGAACTTCTTTTGGGTTCAACCAATTATGGATATAGCATTGATCTCTGGAGTGCAGGGTGCCTGTTGGCTGAGATGTTTCTTGGAAGACCAATTATGCCTGGCAGGACAGAGGTTGAACAGATTCACTTGATCTTCAAACTTTGTGGTTCTCCTTCAGAGGATTACTTTAGAAAACTGAAGCTAACAACAAGCTACAGGCCATCACAACATTACAAACCTAGTTTCCAAGAAAACTTCCAGAAGTTTCCTTCCTCTTCCCAGGGTCTCTTGGCTACACTTCTTGATCTCAACCCTGCCCATCGTGGCACTGCTGCCTCTGCCCTCCAAACTGATTTCTTCACATGTAGTCCATTAGCATGTGACCCTTCAGCTTTGCCAGTAATCAACAAAGACGAGGATGAACGCTTACAAACTAAGAGAGGCAAAAGGGTTTCTAAAAAGGGGCAATTATCTCAAACAAGTAGAAGTGAAGTTAGTCAATCAGGAAAGAAACAAATTGCTGAACAACCCCGTGAAGATACAGAATCGTCAAAAAAAGAGAAGAATATGGAAGAACACAAGCTAGGTCAAGAAACGGGGAATAGTGCTAGCAGCACATCATCGGGCTCAAGATTCTTTATGAACGAAGGGAACATGAATGCATCTGTGTCCCCTGTTTTTCTGTCTAGTGGTAGTGTGAGAAAATCTCCCAAAACAGAGGGCCATCCCAATGCTCTTAAGAACATAAAGAACTATAGTGCTCTGTTACAGGCCTCTATGATAGACATGATCAACCACAATGACGGCAACGAAGTTTCCCAGCTTCGTAGGTCCTTCTCTGCGTTGGATTTTCGTCTTGATCCACACAAGCTATCATACCTCTATGGCTTACGTAAACAGATTTAG	1737	0.4364	MGCICGKFSPPRKVERPKHQVKKRGSGETQRPKLSVHVNKRDENAAAVDVVGGGEKEKPVVKKEKSKVWDHIANENNTKDDKKMAKYEFVEGWPKWLVDNIPTNVLANIVPKSADSYRKLAKIGRGTYSNVYKAREKGTGKVVALKKVRFDTSDSESIKFMAREIMILQKLDHPNVIKLKGLATSRMQYSLYLVFDFMHSDLTRIISRPGEKLTEPQIKCYMQQLLCGLQHCHERGVMHRDIKASNLLVDRKGVLKIADFGLATSIEAERPLTNRVVTLWYRAPELLLGSTNYGYSIDLWSAGCLLAEMFLGRPIMPGRTEVEQIHLIFKLCGSPSEDYFRKLKLTTSYRPSQHYKPSFQENFQKFPSSSQGLLATLLDLNPAHRGTAASALQTDFFTCSPLACDPSALPVINKDEDERLQTKRGKRVSKKGQLSQTSRSEVSQSGKKQIAEQPREDTESSKKEKNMEEHKLGQETGNSASSTSSGSRFFMNEGNMNASVSPVFLSSGSVRKSPKTEGHPNALKNIKNYSALLQASMIDMINHNDGNEVSQLRRSFSALDFRLDPHKLSYLYGLRKQI	578

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr14983g00001	578	CDD	STKc_CDK9_like	117	397	-	-
	Mupr14983g00001	578	FunFam	probable serine/threonine-protein kinase At1g54610	104	199	-	-
	Mupr14983g00001	578	SUPERFAMILY	Protein kinase-like (PK-like)	110	400	IPR011009	-
	Mupr14983g00001	578	MobiDBLite	consensus disorder prediction	1	38	-	-
	Mupr14983g00001	578	ProSitePatterns	Protein kinases ATP-binding region signature.	123	146	IPR017441	GO:0005524
	Mupr14983g00001	578	MobiDBLite	consensus disorder prediction	415	492	-	-
	Mupr14983g00001	578	MobiDBLite	consensus disorder prediction	11	38	-	-
	Mupr14983g00001	578	Pfam	Protein kinase domain	117	397	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr14983g00001	578	ProSiteProfiles	Protein kinase domain profile.	117	397	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr14983g00001	578	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	237	249	IPR008271	GO:0004672\|GO:0006468
	Mupr14983g00001	578	SMART	serkin_6	117	397	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr14983g00001	578	Gene3D	Transferase(Phosphotransferase) domain 1	200	470	-	-
	Mupr14983g00001	578	MobiDBLite	consensus disorder prediction	450	472	-	-
	Mupr14983g00001	578	MobiDBLite	consensus disorder prediction	473	492	-	-
	Mupr14983g00001	578	PANTHER	CELL DIVISION PROTEIN KINASE	115	402	-	-
	Mupr14983g00001	578	Gene3D	Phosphorylase Kinase; domain 1	105	199	-	-
	Mupr14983g00001	578	MobiDBLite	consensus disorder prediction	431	449	-	-
	Mupr14983g00001	578	FunFam	Putative serine/threonine-protein kinase	200	435	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr14983g00001	Mupr-Chr14983	1199	7367	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr14983g00001	112	424	Core Cell Cycle Gene Families	AT5G10270	45.946	9.47e-95	297

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_CDK-CRK7-CDK9	Mupr14983g00001		Pkinase	2e-69	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr14983g00001	K08819		-	gmx:100782603	874.389