Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14978g00001 ATGATGGAACACAACGTGATCGCACCGTTTGTCATAAAAACCTACAACATGGTGAACGATCCCACCACTGATAAACTCATCACGTGGGGCCCAGCCAACAACAGCTTCATCGTCCTCGACCCCCTTGACTTCTCTCACTCCCTCCTCCCTGCTTTCTTCAAGCACAACAACTTCTCCAGTTTTGTTCGCCAGCTCAACACCTATGGCTTCAGAAAGGTGGATCCGGATCGGTGGGAGTTCGCGAACGAGTGGTTCCTGCGGGGACAGAATCACTTGTTGAGGAACATCGCGCGGAGGAAGCACGTTGGAGGAAGGAGCAATTCTCATTCGCATCCCTTGAAGGTGGAGGAGTTGGACGATGAAGCGATGGTGATGGAGATAGCGAGGTTGAAGGAGGAGCAGAAGGCGTTGGAGGAAGAGCTTCAAGGGATGAACAAGAGGTTGGAGACAACAGAAAAACGACCGCAACAGATGATGTCTTTCCTACGCAAAGTCGTCGAGGACCCGCAGGTTCTCTCTCGGATACTCCGAGAGAGAGAGAGAAAACACCTCGGCGAGAAAAAGCGACGCCTCATACCGTCCACGGTGACGGCGACGACCACGACCACGTCGTCGTCTTCCTCCGGCGTCAAGACAGAGTTGGAAGAAGACGAAGGTAATAACATCATATCTTCGTCGCCGGAGACGGGTTGGGAAGTCGATAATAATATATGTTCGCCGCCGGCGGCCGGGTATTGGGGGGAACAGGGGTATGGGTATAATTTCACTGCCGTGTCGACGCCGTTGACGGTGGTTTCGCCGGCGGCGGCAATGGGAGGAGGCTATTTTGGGGAAATGGCGGCGGAGGGGAGTTCGCTGCCGCCTTATCCGTTTTCGCTGTTGGAAGGTGGCTTTTAG 897 0.5418 MMEHNVIAPFVIKTYNMVNDPTTDKLITWGPANNSFIVLDPLDFSHSLLPAFFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEWFLRGQNHLLRNIARRKHVGGRSNSHSHPLKVEELDDEAMVMEIARLKEEQKALEEELQGMNKRLETTEKRPQQMMSFLRKVVEDPQVLSRILRERERKHLGEKKRRLIPSTVTATTTTTSSSSSGVKTELEEDEGNNIISSSPETGWEVDNNICSPPAAGYWGEQGYGYNFTAVSTPLTVVSPAAAMGGGYFGEMAAEGSSLPPYPFSLLEGGF 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14978g00001 298 Coils Coil 120 154 - -
Mupr14978g00001 298 SUPERFAMILY "Winged helix" DNA-binding domain 7 99 IPR036390 -
Mupr14978g00001 298 FunFam Heat shock transcription factor 1 3 100 - -
Mupr14978g00001 298 MobiDBLite consensus disorder prediction 194 210 - -
Mupr14978g00001 298 Gene3D - 2 100 IPR036388 -
Mupr14978g00001 298 PRINTS Heat shock factor (HSF) domain signature 10 33 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr14978g00001 298 PRINTS Heat shock factor (HSF) domain signature 48 60 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr14978g00001 298 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr14978g00001 298 ProSitePatterns HSF-type DNA-binding domain signature. 49 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr14978g00001 298 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 7 213 IPR027725 -
Mupr14978g00001 298 MobiDBLite consensus disorder prediction 194 234 - -
Mupr14978g00001 298 Pfam HSF-type DNA-binding 10 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr14978g00001 298 SMART hsfneu3 6 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr14978g00001 298 MobiDBLite consensus disorder prediction 219 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14978g00001 Mupr-Chr14978 13373 14901 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14978g00001 6 298 HSF AT3G24520 47.130 2.84e-88 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mupr14978g00001 HSF_DNA-bind 5.3e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14978g00001 K09419 - gmx:100794896 491.115