Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14972g00001 ATGGACAAGGGGGTGCCACCTAGCCTCTTCGTCAATGATGGTTCTTTCATGGAGAGGTTCAAGCAACTTCAACAAGAGCAAGAGAAAGGGAAGAGTGTCAAATTAGAGGATTCTAAACCAATTAAGGTTATTTCAGGGTCTTTGTCTCCCAATCCCTCCATTACCAAAACGTCTGTGGACTTGAAGGTTAATGATACAAGGAAAACATCTCAGGGTGGTTCTGGTGGCAAGCTAGCTTTTAGTTTAAAACAAAAGTCAAAGCTAGTGCCACCCCCTGTTAAGTTGAGTGCCGATGAGGATGAAGAAGAAACAGAAGCTGGAGATGTTTCAATTGATGCACCACTGAAACGGCAAAAGTTAGTCCAGGAGGAAGGCATTAACCAATCATCAAGACAACTTGATGTTGCTTATTCCTCAAGTACCTATCAAGAAATGGTGTATTGGCAGGCCTACTACAAGACTAATTTGCATTCCCTTGTTCATGCTCTCGCACCTCCTTCCCCAAGTGATCCTACAGTGAAGAAAGTTGCTGACAAACTAGCAAGTTTTGTGGCTAAAAATGGAAGGCAATTTGAGGATGTTACACGTCAAAAAAATCCTGGGGATACACCTTTCAAATTTTTATTTGATGAGAGATGTGCTGAATACAAGTATTATGAATATCGGCTTGCTGAAGAAGAAAAGGCTCTTGTGCAGTCAAGGGAATCACAGGTGCCTCGTAATGGTGGTACAAGCACTTCACCTTCCAAACAGACTAGTGGCCATCAAAGATCATCTCAGCAGCAAACAGCCTACCAAATTCCTGCATCTGCTTTATATGAAAGTGCTGACAATCCAAGAGCTTCTGGGTCTTCAATTCAAACATCATCAAGCAGTGAAGAGCCCAGTGGTTCATCAAATGCTGATTCTTTGGCACTAATGGAGTTCTACATGAAGAAAGCTGCACGGGAAGAGAAGTATAAACAACCTAAGCAGTCAAAAGATGAGATGCCCCCTCCTGCTTCTCTTCTAGGCAAAAAAGGCCATCATATGGGTGACTTCATTCCTCCAGAAGAACTTGAGAAGTTCTTGGCTACCTGTAATGATGCTGCAGCTCAGAAAGCTGCAAGGGAGGCTGCAGAGAGGGCTAGGATTCAGGCTGATAATGTAGGCCACAAGCTTCTGTCAAAAATGGGTTGGAAAGAAGGCGAGGGTCTGGGTGGCTCTAGGAAGGGTATTGCAGATCCTATCATGGCAGGTAATGTTAAGAAGAATAACTTGGGGGTTGGTGCTCAGGAACCTGGGGAGGTGACTTCCGAGGATGACATATACGAGCAGTACAAAAAGCGGATGATGCTTGGCTACCGTTACAGGCCCAATCCTCTGAACAACCCCCGCAAGGCTTATTACTGA 1392 0.4447 MDKGVPPSLFVNDGSFMERFKQLQQEQEKGKSVKLEDSKPIKVISGSLSPNPSITKTSVDLKVNDTRKTSQGGSGGKLAFSLKQKSKLVPPPVKLSADEDEEETEAGDVSIDAPLKRQKLVQEEGINQSSRQLDVAYSSSTYQEMVYWQAYYKTNLHSLVHALAPPSPSDPTVKKVADKLASFVAKNGRQFEDVTRQKNPGDTPFKFLFDERCAEYKYYEYRLAEEEKALVQSRESQVPRNGGTSTSPSKQTSGHQRSSQQQTAYQIPASALYESADNPRASGSSIQTSSSSEEPSGSSNADSLALMEFYMKKAAREEKYKQPKQSKDEMPPPASLLGKKGHHMGDFIPPEELEKFLATCNDAAAQKAAREAAERARIQADNVGHKLLSKMGWKEGEGLGGSRKGIADPIMAGNVKKNNLGVGAQEPGEVTSEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14972g00001 463 ProSiteProfiles G-patch domain profile. 380 427 IPR000467 GO:0003676
Mupr14972g00001 463 MobiDBLite consensus disorder prediction 232 264 - -
Mupr14972g00001 463 SMART G-patch_5 378 425 IPR000467 GO:0003676
Mupr14972g00001 463 Pfam Surp module 175 225 IPR000061 GO:0003723|GO:0006396
Mupr14972g00001 463 Gene3D Surp module 160 232 IPR035967 GO:0003723|GO:0006396
Mupr14972g00001 463 MobiDBLite consensus disorder prediction 44 77 - -
Mupr14972g00001 463 Pfam G-patch domain 381 424 IPR000467 GO:0003676
Mupr14972g00001 463 MobiDBLite consensus disorder prediction 277 303 - -
Mupr14972g00001 463 PANTHER ARGININE/SERINE RICH SPLICING FACTOR SF4/14 2 463 IPR040169 -
Mupr14972g00001 463 SMART surpneu2 174 228 IPR000061 GO:0003723|GO:0006396
Mupr14972g00001 463 MobiDBLite consensus disorder prediction 317 336 - -
Mupr14972g00001 463 ProSiteProfiles SURP motif repeat profile. 176 219 IPR000061 GO:0003723|GO:0006396
Mupr14972g00001 463 MobiDBLite consensus disorder prediction 234 264 - -
Mupr14972g00001 463 MobiDBLite consensus disorder prediction 43 111 - -
Mupr14972g00001 463 SUPERFAMILY Surp module (SWAP domain) 163 228 IPR035967 GO:0003723|GO:0006396
Mupr14972g00001 463 MobiDBLite consensus disorder prediction 276 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14972g00001 Mupr-Chr14972 1713 7797 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14972g00001 376 436 C2H2 Transcription Factor Family AT5G26610 45.161 4.07e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14972g00001 K13096 - gmx:100786213 750.74