Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14959g00002 ATGATCCATTCGGGTGATGTAAAGGCCCAATCGAAACGATTTCACTTCTCTGAGGAGAGAAAGAACTACTCACTCGCTCTTCACCGGAGACAGCACCGCTGCGACACCACAGAATGTGAAGGTCATATGATGGTAAACCAAAGGGTTGAGCAGCATGTTATGACAGAAGGGCAAAGGAAAAAGAAGAGGAGGAAGACGGAAGTTTTGGTTCCTCGTCCTGCATGTTCATGGGTGTATTTTAGTAAGGAGTTTATCAAAGAGTACATTGCTTCCCATCCTGAGTCACCAGGCCTTAAAGCTGCAACAAAGGCTGCCTCTAATGTGTGGAAGTCGATGAGTCTTGAAGAAAAGGAAAAGTATGCTAAGCATGCGCGTGAAGTGTGGGATGGCTACTTGAGTTCAGGTGCTGCCCCTGCCCCCAAGCCAAGGAAACAGACTAAACTGGTTACAAGATGCTCTCCTGGTCGCTTATTCAATGTGTTACAGCACCTCACACCTGAACAGAAGGAGGCAGTTAAGAACATGGGTTTTGGTAGCCTCCTTGGTCTTAGATGCCGAACACTTCGGCGCAGTTTGTGTCTTTGGTTATTGGAGAGGTTTGACACTACTAATTGCAGCTTGGAGATCTGCAATGTGCATGTGCCATTAGCTCCAAAAGATGTAGAGACAGTATTGGGATTATCGGCCAGTGGCAAAGAAGTGGTGAACTCTGGTCCAGAAGACTTGATTTCAGATTTACGTAACAGTTACAAAGCGATAAATCATGGAATTTCAGTGCGAATTTTAGAGGAGCGGTTGGCAACTGCAGAGGCTGGAGATGATTTTAAGAGGTCGTTTGTTCTCTATGTGCTGGGGACGCTTCTGTCCCCAACAGCTAGGCTGGATGTTAGCCCATCATTCCTCCACTTTTTGACAAATATGGATATTGTCCATCAGTACAACTGGGGTAAATTCTTGCTTGATAGGCTGGTTCGAGAGGTATCACGCTTCCATCAAGGGAAGCAAAGAGCTGTTGGTGGTTGTCTCTTATTTCTGCAGCTTTTCTACTATGAGAGCACATCTCTTAAAGGGTCTTCTGTTCCAGTTCCAACGATTGTTCCATATCTGTTTTCTTGGGGTGAGGAGGAGATTGCTGAGAGAGAAAAACAAGAAAAGGAACTTGGCGGCTATGGTTCTGGGGAGCTAGCTAGCAAGAAGAAATGCCATCATATGGAGTTCCCAGAGTATAAAGATCGTCCAAATGGCCCACCAATCACCCCAGAAAGCACTAGGATTGGGCATGGTCCTCTTAGACCAGAATCAAATGAGGTGATGATGCCGTTGCCATTCATTGCTAGCCTCTTAGCATGCTCACAAGAGCATCTTAAAATTTTTACCTTCTCAGTAACTAATTTGTTTCTACAGGAAGACATCCTGACTAGAACTGTGTTGAGTGGAGATGTAGATTTAGTAGCTGAATCAATTGAAGCTCCTTGTCGGAACAGAGAATATGGTTGCATTGAAACTGTGGATTACATGACCAGCAATAACCATGAAGTGACATGCATCTATTCTCCATGTACCTGTCCACTTCAAGACTGCAACTATGTTGGGTCATTTGAACAGTTGGCATTGCATTTTAGCAGTAAACACTGGGATTCTGTAAGACGATTCAAATATAATCATCCATTGGCTATCTCTTTACAGATGGATGAACAATTCCTTGTCCTCCAGGCAGAAGAAGATGGGGTTCTCTTTCTCCTCAACAAGGGCACAGAAACTAATGGGAATACTGTGATGATAACCTGTATTGGTCCAAGCTCATCAGAAGAGAGGTTTATTTATGAGATTGTTTCATGTAGGGGAAGAAGTTCTCTCAGATTAAAGTCTGTAGCTGAGAATTTTCCTGGTCGAATGGAGGATTTTCCCCCAGTAGATTTTCTTTTTATTCCTTTTAATTTTCTTGTTTCTTCTGCGGAGATCAATATAGATATTTGTATATGGAATTCTACTGAGCATAATGTTGATTTGTGA 2013 0.4337 MIHSGDVKAQSKRFHFSEERKNYSLALHRRQHRCDTTECEGHMMVNQRVEQHVMTEGQRKKKRRKTEVLVPRPACSWVYFSKEFIKEYIASHPESPGLKAATKAASNVWKSMSLEEKEKYAKHAREVWDGYLSSGAAPAPKPRKQTKLVTRCSPGRLFNVLQHLTPEQKEAVKNMGFGSLLGLRCRTLRRSLCLWLLERFDTTNCSLEICNVHVPLAPKDVETVLGLSASGKEVVNSGPEDLISDLRNSYKAINHGISVRILEERLATAEAGDDFKRSFVLYVLGTLLSPTARLDVSPSFLHFLTNMDIVHQYNWGKFLLDRLVREVSRFHQGKQRAVGGCLLFLQLFYYESTSLKGSSVPVPTIVPYLFSWGEEEIAEREKQEKELGGYGSGELASKKKCHHMEFPEYKDRPNGPPITPESTRIGHGPLRPESNEVMMPLPFIASLLACSQEHLKIFTFSVTNLFLQEDILTRTVLSGDVDLVAESIEAPCRNREYGCIETVDYMTSNNHEVTCIYSPCTCPLQDCNYVGSFEQLALHFSSKHWDSVRRFKYNHPLAISLQMDEQFLVLQAEEDGVLFLLNKGTETNGNTVMITCIGPSSSEERFIYEIVSCRGRSSLRLKSVAENFPGRMEDFPPVDFLFIPFNFLVSSAEINIDICIWNSTEHNVDL 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14959g00002 670 Gene3D High mobility group box domain 54 133 IPR036910 -
Mupr14959g00002 670 Pfam Seven in absentia protein family 482 627 IPR018121 GO:0005737|GO:0006511|GO:0007275
Mupr14959g00002 670 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 121 664 IPR044286 -
Mupr14959g00002 670 Pfam Plant mobile domain 219 351 IPR019557 -
Mupr14959g00002 670 ProSiteProfiles Zinc finger SIAH-type profile. 487 545 IPR013010 GO:0008270
Mupr14959g00002 670 SUPERFAMILY TRAF domain-like 488 660 - -
Mupr14959g00002 670 CDD HMG-box_SF 72 131 - -
Mupr14959g00002 670 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 484 540 IPR013083 -
Mupr14959g00002 670 FunFam E3 ubiquitin-protein ligase SINAT3 484 540 - -
Mupr14959g00002 670 Pfam HMG (high mobility group) box 71 132 IPR009071 -
Mupr14959g00002 670 SMART hmgende2 69 140 IPR009071 -
Mupr14959g00002 670 SUPERFAMILY HMG-box 56 132 IPR036910 -
Mupr14959g00002 670 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 70 126 IPR009071 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Mupr14959g00002 Sina 3.6e-15 CL0389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14959g00002 - - gmx:100782920 1056.59