Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1491g00003 ATGGGGTTCTACGCCGAAGACCCTATCTCTGGGTTGACAATAGGTCAGGCCATATACGAGGTAGCTCTGATAATTGCAGTTGTGAGATGGATCTTGTGCTTGGTTGTGAGAGTGATGGATGACAGAAGGACAGGGTCTGATGCCGAAGCTTGTTCTCCTATGACAAGGGACAAGGACAGCACTAGTCTTGCGTTGACGACGTTCGGCGAGATTGTGGAGAGGCTGCCACAGACGGAGGACACGTGTGCAGTTTGCCTGAGTCAGATGAACCCGGAGGACGAGGTTAGGGAGCTGATGAACTGTTACCACGTGTTCCACAGAGAGTGCATAGACAGATGGGTGGAGCACGAGCATGAGAACCACAACGCCACGTGTCCACTCTGCAGGTCTCCTCTTCTTAGTTCTTGTTATCACCAAACCTCTACTGCTTGTGCTCCTCCTCCTCAGCCTAGCTGGGCTGTGGAGAGACTTCTCTATCTCTTTGGGGATGATCTCCTCCCTTTATGTTAA 510 0.5157 MGFYAEDPISGLTIGQAIYEVALIIAVVRWILCLVVRVMDDRRTGSDAEACSPMTRDKDSTSLALTTFGEIVERLPQTEDTCAVCLSQMNPEDEVRELMNCYHVFHRECIDRWVEHEHENHNATCPLCRSPLLSSCYHQTSTACAPPPQPSWAVERLLYLFGDDLLPLC 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1491g00003 169 SUPERFAMILY RING/U-box 76 135 - -
Mupr1491g00003 169 ProSiteProfiles Zinc finger RING-type profile. 82 129 IPR001841 -
Mupr1491g00003 169 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 41 142 IPR013083 -
Mupr1491g00003 169 SMART ringv_2 81 129 IPR011016 GO:0008270
Mupr1491g00003 169 Pfam Ring finger domain 80 129 IPR001841 -
Mupr1491g00003 169 SMART ring_2 82 128 IPR001841 -
Mupr1491g00003 169 PANTHER RING ZINC FINGER PROTEIN-RELATED 26 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1491g00003 Mupr-Chr1491 23270 25452 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1491g00003 1 165 C3H Transcription Factor Family AT5G20885 47.222 1.94e-45 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1491g00003 K16281 - gmx:100306203 259.61