Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1490g00001 ATGAGAAACAATTCCATGACAATTTCCCTATCCCAAAACTCCCCTCTCTCCGACTCAGAATCCACATCCTCCTTAGACCATCGTAATGGCTCCTCCTACCAATGCCACCAACATCTACCACAACCACCATCTACTATTATGAATCAGCCCCCAAAGTATCTTCCCTTTGCGATCCCACCTACCAAGAAGCCACGTGGGAGGCCCCTAGGATCCAAGAATAAGTCTAAGCTAACCTATGTCCCTAGGACCCAACCCATTGATCCTTCTATGAAACTCGTAAAAGTCGAAGTTCCCCCTGGTAGAGACATCATCGAGTCCATCATTGAAGTTACTCGTAGAGGCCACGTGAGCCTTACAATCCTTAGTGCGAATGGCATGATCGCTAGTGTCACCCTTAGCAATGCACCCTACAGTGTACCTGCCCTCACACTCCATGGGCCTTTCGCCTTACTTTCCCTTACTGGCTTCTACCTGTACAACAACCAATACACCTTTAGCCAAGGAGCCACCCTTCCCTCTCTCCCCTCTTTTGGAATCAACCTCTCCACTTCACAAGGTCAGGTCTTTGGTGGCATTGTTGGTGGCAAAGTTATTGCTGCTGACGATGTTACCATCGTGGCCTCTACCTTCAAGAATGCTGAGATTTACCGGTACGTTCCTAAAGATGAAGAAAGGTACAACGATGATAATAATAATAATAACCCTAATCATTTTAGTACGGGTGACCAGTCATCGAGGTTCAACATTGTTACTACGAAATCCTTGGGTGGGTTGCTCCATTCTTCTACTACTCCCTCAAGAATGGTTCAATCTGCTATCTCTAACGCTGAGCATGGAGACTAG 843 0.4674 MRNNSMTISLSQNSPLSDSESTSSLDHRNGSSYQCHQHLPQPPSTIMNQPPKYLPFAIPPTKKPRGRPLGSKNKSKLTYVPRTQPIDPSMKLVKVEVPPGRDIIESIIEVTRRGHVSLTILSANGMIASVTLSNAPYSVPALTLHGPFALLSLTGFYLYNNQYTFSQGATLPSLPSFGINLSTSQGQVFGGIVGGKVIAADDVTIVASTFKNAEIYRYVPKDEERYNDDNNNNNPNHFSTGDQSSRFNIVTTKSLGGLLHSSTTPSRMVQSAISNAEHGD 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1490g00001 280 MobiDBLite consensus disorder prediction 44 62 - -
Mupr1490g00001 280 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 26 236 IPR014476 GO:0003680
Mupr1490g00001 280 MobiDBLite consensus disorder prediction 224 244 - -
Mupr1490g00001 280 Gene3D - 91 229 - -
Mupr1490g00001 280 MobiDBLite consensus disorder prediction 1 76 - -
Mupr1490g00001 280 MobiDBLite consensus disorder prediction 258 280 - -
Mupr1490g00001 280 Pfam Plants and Prokaryotes Conserved (PCC) domain 95 212 IPR005175 -
Mupr1490g00001 280 SUPERFAMILY AF0104/ALDC/Ptd012-like 89 223 - -
Mupr1490g00001 280 MobiDBLite consensus disorder prediction 258 273 - -
Mupr1490g00001 280 MobiDBLite consensus disorder prediction 1 43 - -
Mupr1490g00001 280 CDD DUF296 95 199 IPR005175 -
Mupr1490g00001 280 FunFam AT-hook motif nuclear-localized protein 17 89 226 - -
Mupr1490g00001 280 ProSiteProfiles PPC domain profile profile. 87 232 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1490g00001 Mupr-Chr1490 3069 4615 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1490g00001 62 262 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 31.884 1.75e-24 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1490g00001 - - gmx:100818645 275.404