Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14893g00003 ATGAACAAAGCACATGCAACCAAAGACATAGAGAGTGGCAATGTATGGAACCTGTTTAGGGTACAAGATCAAGGAAGGAACCTGATTGTCAAGGCAGATGAAGACATGCAGTTGAAGTTGTTTTTGATTGTTGAGTTGCTTGGAAGTCCTGATGGGCCTCTTGTGGCATTGGCTTTCAAGTTGGAGGAAGGGAGGTTTGGTCAATTAACATATCTAAGAATTTATGAGGGTGTGATTCGGAAGGGTGATTTTATTATTAATGTGAACACCGGCAAGAAGATCAAGGTTCCTCGATTGGTTCGGATGCATTCTGATGAGATGGAGGACATTCAAGAGGCTCATGCTGGGCAAATAGTTGCTGTATTTGGTGTTGATTGTGCATCAGGAGATACTTTTACTGATGGTTCAGTTAGATACACAATGACTTCTATGAATGTTCCTGAGCCAGTGATGTCATTAGCTGTACAGCCGGTGTCTAAAGATTCTGGAGGGCAATTTTCAAAAGCTTTGAATCGCTTCCAAAGAGAGGATCCTACTTTTCGTGTTGGCTTGGACCCGGAGAGTGGGCAGACTATCATTTCTGGAATGGGGGAACTGCATTTGGATATCTATGTTGAACGCATAAAGAGAGAGTACAAGGTTGATGCTTCAGTTGGAAAGCCCCGTGTTAACTTCAGAGAAACTGTTACTCATCGCGCTGATTTTGACTATTTACATAAGAAGCAAACTGGAGGGCAAGGTCAATATGGACGGGTAATTGGGTATATTGAACCACTTCCTGCAGGGTCACCAACTAAGTTTGAATTTGAAAACATGCTTGTTGGTCAAGCTATTCCATCAAATTTTATCCCTGCAATTGAGAAGGGTTTCAAAGAAGCTGCGAACTCTGGTGCCTTAATTGGACATCCAGTTGAAAATCTCCGAGTTGTCTTGACAGATGGTGCTGCCCATGCTGTTGATTCCAGTGAACTTGCATTTAAGTTGGCTTCTATCTATGCTTTTAGACAGTGTTATGCAGCTTCCAGACCGGTTATATTAGAACCTGTTATGCTTGTTGAGCTGAAAGTACCAACAGAATTTCAGGGAGCTGTTGCTGGTGACATTAACAAGAGAAAAGGTGTGATTGTTGGAAATGATCAGGAAGGAGATGATTCTGTCATTACTTCTCATTTCGTTCCCATGAGTTTTGCTCTACCTGGGTACTGTGTGTCCGCCGTCGACCGCCACCATCTATCGTCGGCCGCCACTGTTGACCGCCGCCGTCTGCCGTCGACCGCCACCGTCTTCCGCTACCTACCGCTGACCGCCGTCGGAAAGTTGTCTCAGTATCCAGTGACTGAGAGTCGTCGTTTGCCGCTGTCATTGCCACTGTTCGCTGTTATCCCACCGTCAGACTGCCATTCTTCACCGCAAGCCCACCTTCCTTTTCACAAGGATCTCTTATCTCCTTTTTGGGAACCCCAACTATTACAACAGAGAAACTCAACTGAAAAAATTATAGAGCTTGGTCAGATTCAGTTGAGTTGTGGTTTTTGGGACAAAGGTTTCATGACCATTTGGAGAAACAAGAGGCTAAAATACTAG 1584 0.4444 MNKAHATKDIESGNVWNLFRVQDQGRNLIVKADEDMQLKLFLIVELLGSPDGPLVALAFKLEEGRFGQLTYLRIYEGVIRKGDFIINVNTGKKIKVPRLVRMHSDEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVRYTMTSMNVPEPVMSLAVQPVSKDSGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIKREYKVDASVGKPRVNFRETVTHRADFDYLHKKQTGGQGQYGRVIGYIEPLPAGSPTKFEFENMLVGQAIPSNFIPAIEKGFKEAANSGALIGHPVENLRVVLTDGAAHAVDSSELAFKLASIYAFRQCYAASRPVILEPVMLVELKVPTEFQGAVAGDINKRKGVIVGNDQEGDDSVITSHFVPMSFALPGYCVSAVDRHHLSSAATVDRRRLPSTATVFRYLPLTAVGKLSQYPVTESRRLPLSLPLFAVIPPSDCHSSPQAHLPFHKDLLSPFWEPQLLQQRNSTEKIIELGQIQLSCGFWDKGFMTIWRNKRLKY 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14893g00003 527 Gene3D Elongation Factor G (Translational Gtpase), domain 3 153 226 - -
Mupr14893g00003 527 FunFam Elongation factor G, mitochondrial 33 149 - -
Mupr14893g00003 527 CDD mtEFG1_II_like 54 134 - -
Mupr14893g00003 527 Gene3D - 343 403 - -
Mupr14893g00003 527 Gene3D - 227 342 IPR014721 -
Mupr14893g00003 527 Gene3D Translation factors 43 152 - -
Mupr14893g00003 527 FunFam Elongation factor G 150 226 - -
Mupr14893g00003 527 SUPERFAMILY EF-G C-terminal domain-like 344 395 IPR035647 -
Mupr14893g00003 527 Pfam Elongation factor G C-terminus 345 395 IPR000640 -
Mupr14893g00003 527 Pfam Elongation factor Tu domain 2 67 133 IPR004161 GO:0005525
Mupr14893g00003 527 SUPERFAMILY Translation proteins 49 144 IPR009000 -
Mupr14893g00003 527 SUPERFAMILY EF-G C-terminal domain-like 144 221 IPR035647 -
Mupr14893g00003 527 CDD EFG_III 147 222 IPR009022 -
Mupr14893g00003 527 SMART EFG_IV_2 222 342 IPR005517 GO:0005525
Mupr14893g00003 527 Pfam Elongation Factor G, domain III 146 220 IPR041095 -
Mupr14893g00003 527 SMART EFG_C_a 344 425 IPR000640 -
Mupr14893g00003 527 FunFam Elongation factor G 227 364 - -
Mupr14893g00003 527 SUPERFAMILY Ribosomal protein S5 domain 2-like 221 343 IPR020568 -
Mupr14893g00003 527 CDD EFG_mtEFG1_IV 225 340 IPR005517 GO:0005525
Mupr14893g00003 527 Pfam Elongation factor G, domain IV 221 341 IPR005517 GO:0005525
Mupr14893g00003 527 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 44 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14893g00003 Mupr-Chr14893 1027 8535 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14893g00003 50 373 Eukaryotic Initiation Factors Gene Family AT1G56070 24.041 5.32e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14893g00003 K02355 - gmx:100796646 670.618