Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14891g00001 CACGGCTATATCATGAAACGAAACTTTGATCTTGAAGTCGAGGCATGTGCAGAATATGAATCTGAGGTTAGCAGCCAGGTTGCTTCCAATGTATCTGTCCAAGAAACCTCTTTAGGTCCTTGTAGTGACAGCCTCACTAACACTTCCAACATCACCAATCCAATAGGGATACATCCTAATTCAGATGCTATTTTACTTGACTTAACTCTAAACTTGAAAAATAGTGAGCCAGGGGCAAGAGATTCAATAGGATTCTCTTTCTCAAGCACTAGTGAGAGCAGCAATGAACCTGCTTCTCAAACTACAGCAGCAACCATTCCACGAGTCTTCTCTTGCAATTACTGTCAGCGCAAGTTTTTCAGCTCTCAGGCTCTTGGTGGACACCAGAATGCACACAAGAGAGAAAGGACATTAGCAAAAAGGGCAATGAGAATGGGATTTTTCTCTGAAAGGTATGCCAATCTAGCATCTCTCCCTCTGCATGGTTCTTTCAGGTCCTTAGGCATAAAGGCACACTCTTCACTGCACCATGGTTTCTCACCAACAATGAGGCCTCCTGAGATAAAAAACAATGCAAGATTTGATCAAGGGTATCTTGGCCTCCCAATATTCTTGGAGGATGACGAGTCAGAGTTGTTGTGGCCGGGTAGTTTTCGGCAGGTTGCTGAGGCAGAATTTCATACTGAGTGGAAGTTCAAATTTGAGTTTTACTGGGGTGGAGCCACCTGTAGACATAGAGAACTCAACACCAGATTTGACTTTGAAACTTTGAAGGAGGTCTTGAATGAAAAAAGGACTCAGGTGAAAACAACATTTAAAGTACAAGAGGCTAACAAAGGGCTTAATGACAGCAAATTAAATTTGAAAGAAGATTTCATATAA 882 0.4206 HGYIMKRNFDLEVEACAEYESEVSSQVASNVSVQETSLGPCSDSLTNTSNITNPIGIHPNSDAILLDLTLNLKNSEPGARDSIGFSFSSTSESSNEPASQTTAATIPRVFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRAMRMGFFSERYANLASLPLHGSFRSLGIKAHSSLHHGFSPTMRPPEIKNNARFDQGYLGLPIFLEDDESELLWPGSFRQVAEAEFHTEWKFKFEFYWGGATCRHRELNTRFDFETLKEVLNEKRTQVKTTFKVQEANKGLNDSKLNLKEDFI 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14891g00001 293 ProSiteProfiles Zinc finger C2H2 type domain profile. 110 137 IPR013087 -
Mupr14891g00001 293 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 61 186 IPR044246 GO:0009788
Mupr14891g00001 293 FunFam Zinc finger protein 2 87 156 - -
Mupr14891g00001 293 ProSitePatterns Zinc finger C2H2 type domain signature. 112 132 IPR013087 -
Mupr14891g00001 293 MobiDBLite consensus disorder prediction 83 102 - -
Mupr14891g00001 293 Gene3D Classic Zinc Finger 88 155 - -
Mupr14891g00001 293 SUPERFAMILY beta-beta-alpha zinc fingers 108 137 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14891g00001 Mupr-Chr14891 2319 7376 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14891g00001 92 224 C2H2 Transcription Factor Family AT1G66140 57.233 1.14e-46 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr14891g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14891g00001 - - gmx:100794851 400.979