LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr14867g00006	ATGGATAGGGTGTTCTCAGTGGACGAAATCTCCGATCACTTCTGGTCCCCGCCGATCCAGGTCTCCGGCGCCGATGAGTCTTCCAAGATGAGCCGCAGCGCTTCCGAGTGGGCCTTCCAGCGCTTCCTCCAGGAAGCTTCCTCCTCCGCACCCTCTCCCCCCTCTTCTTCCTCTGCCGCCGCCGACGTCGTCTTCGTCGAGATCGACGATCAACCCAAACCCATCCCTCCCCCTCCAACAAACGCCGCCGTTTTGCCCAATGCCCCTGTTCCCGTACCCCTTGATTCCGAGGAATACCAGGCCTTCCTCAAGAGCAAGCTCAATCTCGCATGCGCCGCGGTCGCCATGACTAGGGGATCTTTGGCTAAATCTCAAGACCCAACCACATTACCTGATGGTGGATCACAGCAGACTGATCCTTCTCAAGTTGGATCTCAGACTACTTCTAAAGGATCTATTCCTTCTGGAAAGGATCCATCTAAGCTACAAGATAAAGATACCATAGTACCAGCTGGGATTCCTTCCATACCTACTACCATGCAAAAGAAACCTGCTTTTGCAATTAGGCCATCAACAAGTGGATCATCAAGAGAGCAGTCAGATGATGATGATGCTGAGGGAGAGACATCTATGAATGAGAACATGGACCCTGCTGATGCAAAACGAGTAAGGAGGATGCTATCCAATAGGGAGTCAGCCCGACGCTCAAGAAGAAGAAAGCAGGCTCATTTAACTGACCTGGAAACACAGGTTTCTCAATTAAGAGGTGAAAATTCTTCCTTGTTAAAGCGCTTTACTGATGTTAGTCAGAAATACAACGATTCTGCTGTTGACAACAGAGTATTAAAAGCTGATGTTGAAACGTTAAGAGCGAAGGTGAAGATGGCTGAGGAGACCGTGAAAAGAATTACTGGGTTGAACCCAATGATTCATGCCATGTCTGAGATATCATCAATGGGCATGCCATCATTTGATGGAAGAAGCCCTTCTGACACTTCAGGTGATGCAGCTGTTCCTGTGCAAGATGACCCACATCATCACTTCTATCAACCCACATCTAATAATCCTATTCCCAGTCATGATCTGAGAGTGAACAATGGGTTGGGGGGCATTTCTTCAATTGAAAATGTGCAGCAGCAGAACGCCGCAGCAGTGGTAGGTGGGAACAAGATGGATCAAACAGCTTCCCTGCAGCGGGTGGCCAGCTTGGAACATCTTCAGAAGCGGATTCGTGGTGGACCTCCATCTAATGGGGACCAGTAA	1263	0.4941	MDRVFSVDEISDHFWSPPIQVSGADESSKMSRSASEWAFQRFLQEASSSAPSPPSSSSAAADVVFVEIDDQPKPIPPPPTNAAVLPNAPVPVPLDSEEYQAFLKSKLNLACAAVAMTRGSLAKSQDPTTLPDGGSQQTDPSQVGSQTTSKGSIPSGKDPSKLQDKDTIVPAGIPSIPTTMQKKPAFAIRPSTSGSSREQSDDDDAEGETSMNENMDPADAKRVRRMLSNRESARRSRRRKQAHLTDLETQVSQLRGENSSLLKRFTDVSQKYNDSAVDNRVLKADVETLRAKVKMAEETVKRITGLNPMIHAMSEISSMGMPSFDGRSPSDTSGDAAVPVQDDPHHHFYQPTSNNPIPSHDLRVNNGLGGISSIENVQQQNAAAVVGGNKMDQTASLQRVASLEHLQKRIRGGPPSNGDQ	420

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr14867g00006	420	Gene3D	-	220	274	-	-
	Mupr14867g00006	420	Coils	Coil	237	264	-	-
	Mupr14867g00006	420	MobiDBLite	consensus disorder prediction	71	86	-	-
	Mupr14867g00006	420	MobiDBLite	consensus disorder prediction	347	361	-	-
	Mupr14867g00006	420	MobiDBLite	consensus disorder prediction	323	364	-	-
	Mupr14867g00006	420	FunFam	BZIP transcription factor	219	270	-	-
	Mupr14867g00006	420	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	219	273	IPR004827	GO:0003700\|GO:0006355
	Mupr14867g00006	420	PANTHER	BASIC LEUCINE ZIPPER 63	1	416	-	-
	Mupr14867g00006	420	SMART	brlzneu	217	281	IPR004827	GO:0003700\|GO:0006355
	Mupr14867g00006	420	Coils	Coil	279	299	-	-
	Mupr14867g00006	420	Pfam	bZIP transcription factor	220	270	IPR004827	GO:0003700\|GO:0006355
	Mupr14867g00006	420	CDD	bZIP_plant_GBF1	222	273	IPR045314	GO:0003700\|GO:0006355
	Mupr14867g00006	420	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	224	239	IPR004827	GO:0003700\|GO:0006355
	Mupr14867g00006	420	MobiDBLite	consensus disorder prediction	228	247	-	-
	Mupr14867g00006	420	Pfam	Basic leucine-zipper C terminal	288	415	IPR020983	-
	Mupr14867g00006	420	MobiDBLite	consensus disorder prediction	119	223	-	-
	Mupr14867g00006	420	MobiDBLite	consensus disorder prediction	68	90	-	-
	Mupr14867g00006	420	MobiDBLite	consensus disorder prediction	121	156	-	-
	Mupr14867g00006	420	SUPERFAMILY	Leucine zipper domain	221	271	IPR046347	GO:0003700\|GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr14867g00006	Mupr-Chr14867	54828	59353	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr14867g00006	1	310	bZIP Transcription Factor Family	AT4G02640	40.000	6.34e-49	169

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Mupr14867g00006		bZIP_C	5.9e-47	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr14867g00006	K25784		-	gmx:100170702	644.425