Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14855g00001 CTCCCTTCTCCCTTCTCCCTTCTCCCATGTGAACAAGCACCAAACACAGTTCCATCGACAACACTCTTCAATTCTTCCCCAAAAATGAGTCAGTGTGTTCCCAGCTGGGACGTCGACGACAACCCACCACCCCCAAGAGTCTCTCTTCGCTCCAACTCCAATTCAACTGCCCCTGATGTCCCCATGTTGGACTACGAAGTTGCTGAACTGACATGGGAAAATGGACAACTTTCTATGCATGGCTTAGGGCTACCGCGTGTGCCGGTGAAACCCCCCACAACAGCCACCAATAAGTACACATGGGAGAAGCCTCGCACAAATGGCACCTTGGAGTCCATAGTGAACCAAGCCACGAGCTTACCCCTCCGCGGAAAACCAACGTTAAATGGCCACGGCGTTTACGGGAACTTCATGGTGCCGTGGTTCGACTCCCATGGCGGCGCCTCCGCCGCCGCGAACACGGTGGCGATGGACGCATTGGTGCCCTGCTCAAACCGGGAGCAGAGCAAGCAGGGCATGGAGTCGGTCCCCAGCACGTGCATGATGGGGTGCTCCACACGTGTGGGGTCTTGCTGCGGCAACCAGGCGGCCAAGGGCGCGGGGCACGAGCTGAGTGGGAGGGATCAGAGTGTGAGTGGAAGTGCCACGTTTGGGAGGGATAGCAAGCACGTGACCCTTGACACGTGCGACAGGGAGTTCGGTGTGGGTTTAGCTTCCACCTCCATCAACTCGCTGGATAACACCAGCTCCGCTAAACACTGCACCAAGACCACCACTGTTGACGACCACGATTCTGTTTCCCACAGTAAACCAGTGGGGGAAGAAGGGGGTGACGAGAAGAAAAAGAGAGCAAACGGAAAATCGTCGGTGTCCACCAAGAGGAGCAGAGCTGCAGCCATACACAACCAATCTGAAAGGAAAAGGAGGGATAAGATAAACCAAAGAATGAAGACATTGCAAAAGTTGGTCCCAAATTCCAGCAAGAATGATAAAGCTTCAATGTTGGATGAGGTGATAGAATATTTGAAGCAGTTGCAAGCACAAGTGCAGATGATGAATAGAATCAACATATCATCGATTATGCTGCCATTGACCATGCAACAACAGCTTCAAATGTCAATGATGTCTCCAATGAGCATGGGATTAGGGATGGGCATGGGAATGGGGATGGGGATGGATATGAACTCCATGAACCGTGTTAACCTCCCTGGCATCCCTCCAGTGCTCCACCCTTCTGCCTTCATGCCTATGGCGGCGTCATGGGATGCCGCAGCCGGCGGCGACCGACTTCAAGGGACACCGGCCACCGTGATGCCTGACCCTTTAAATTTGTCTACATTATTTGGATGCCAATCACAGCTTATACCTCATCACCCTTCTATGTTATAA 1389 0.5292 LPSPFSLLPCEQAPNTVPSTTLFNSSPKMSQCVPSWDVDDNPPPPRVSLRSNSNSTAPDVPMLDYEVAELTWENGQLSMHGLGLPRVPVKPPTTATNKYTWEKPRTNGTLESIVNQATSLPLRGKPTLNGHGVYGNFMVPWFDSHGGASAAANTVAMDALVPCSNREQSKQGMESVPSTCMMGCSTRVGSCCGNQAAKGAGHELSGRDQSVSGSATFGRDSKHVTLDTCDREFGVGLASTSINSLDNTSSAKHCTKTTTVDDHDSVSHSKPVGEEGGDEKKKRANGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKNDKASMLDEVIEYLKQLQAQVQMMNRINISSIMLPLTMQQQLQMSMMSPMSMGLGMGMGMGMGMDMNSMNRVNLPGIPPVLHPSAFMPMAASWDAAAGGDRLQGTPATVMPDPLNLSTLFGCQSQLIPHHPSML 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14855g00001 462 Coils Coil 302 322 - -
Mupr14855g00001 462 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 299 357 IPR036638 GO:0046983
Mupr14855g00001 462 SMART finulus 302 351 IPR011598 GO:0046983
Mupr14855g00001 462 MobiDBLite consensus disorder prediction 256 286 - -
Mupr14855g00001 462 CDD bHLH_AtPIF_like 296 356 IPR047265 -
Mupr14855g00001 462 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 296 345 IPR011598 GO:0046983
Mupr14855g00001 462 MobiDBLite consensus disorder prediction 241 255 - -
Mupr14855g00001 462 MobiDBLite consensus disorder prediction 197 218 - -
Mupr14855g00001 462 Pfam Helix-loop-helix DNA-binding domain 301 346 IPR011598 GO:0046983
Mupr14855g00001 462 MobiDBLite consensus disorder prediction 241 312 - -
Mupr14855g00001 462 MobiDBLite consensus disorder prediction 35 56 - -
Mupr14855g00001 462 Gene3D - 291 356 IPR036638 GO:0046983
Mupr14855g00001 462 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 67 413 IPR031066 -
Mupr14855g00001 462 FunFam transcription factor UNE10 isoform X1 291 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14855g00001 Mupr-Chr14855 2006 6774 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14855g00001 29 456 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00050 51.259 6.87e-101 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr14855g00001 HLH 8.5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14855g00001 - - gmx:100798775 672.93