Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14853g00001 GGCCCAGCTGAAGAAGTTAATGAAAGTATTAAAAGCAACGAAAACGAAGTGAGCTCTCAAGTATCACTTGAATCAATATTGCAGAGGCCCCTTAGGATGAATCTCCCTGAACAAGGTCCCAGTAGTGGTGATGAATCCCCTAATAATGCTCCTTCAAGTTCCGTACGAAATAGACCATCAAACGATGTTGATTTGTCACTAAACTTAGGCCATGAGGATGCAATAAGATCTGCTGCCATTGCCAACAATGTTTCACCAGGAGGAATGAATGGAGGCACCTCAACCAACGTTACGCTCTTATCATCCAAGAGAACATCTGGAGAATTTGAATATGGCGGAAGTTCAAACATGGGTGAACAAGCTTCACTGCCCAAACGACGTGTCACTGAGTCACATGTCAGTGCCAATAACAATGTGAACCCATCACCATCACCGAATCTCATGCAAGGACGTGATGTTAACCCACAGAATGAAGCAGCTCCTACTCCACAACAACAACAACAACATCATGATCATCATAATGCTGTTGTGCAGCACCGTCCGCTGCACAGCCAAGCCTCCTCGCAACGTAACCTACTGCCTCTTTCCATGAGCGCACGAAACACTCCTCACGTGACTGTTCCCTCTGATACTCAAACCGTAGTTGGGAATTTTTCAGAAAACAGATCTTATATCGACAATGATGGTGTTTTTGTTGGACGGAGTCGTTTTACTTTCTCCCACACATTCAATCCCGCTGAACCGATACAGTTAATAACAAGATATGTGGATGATAATGGTAGAGTTCGTAATGCTCGAGGAATTTTCTACCACCCTCTCAGTGACCAAAATTACCCCTCCTCAGCTTCAGGTCCTTCAGAAGGACCACAAGAAATATTGAACCATTCTGCTGCAGCAGCTAGTTCTAGAACTCGGAACTCTCGTAATCAAATCACAATACCTTCAGTTCGACCTCATGTTAGGCTTCCATCTCAGGTGTTAAAAAATGAATCAAAAACTCCGCATGACAGGTCACTCCGTCTGTACTTCAAATCTGTTGTGGACTATGGTAATGCAGACTTTGTGCAAAACAATATATTGATGAGAAAGAGGGTCGTGATTGAAGCACAAGTGCAATCTATCCTGGATCACCTTCGCAGTGGTCGCCCTCTATTGTTTGAGGAATTGATGGTCCTTGACTATTCACTTGTGTTGCAAGCCTTTGAGCATACGAGGATCCGAAATCTATTTGATGTTTCGCAACCACACATAGGATTGACTGCCGAAACAATCATGCAATACATTACGCGTGAAAATTTCGTGTCACCTAATAACGAGGATCCAGAAGATGGAGAAAAATGCGTCATCTGTCTGGAGAAATATGAGGATGGAGACGAAATTGGGAAGCTGGATTTATGTGTGCACAAGTTTCACGTTCAATGCATCAAACAATGGCTCGTGAGCAGGAACACATGCCCGATCTGCAAACGAATTGCATTGGCTATGAATAATGTCGTCCAAAATGAAGCTGGAGCTGAAGTTAATAATGAAAATGTCAATGCT 1542 0.4345 GPAEEVNESIKSNENEVSSQVSLESILQRPLRMNLPEQGPSSGDESPNNAPSSSVRNRPSNDVDLSLNLGHEDAIRSAAIANNVSPGGMNGGTSTNVTLLSSKRTSGEFEYGGSSNMGEQASLPKRRVTESHVSANNNVNPSPSPNLMQGRDVNPQNEAAPTPQQQQQHHDHHNAVVQHRPLHSQASSQRNLLPLSMSARNTPHVTVPSDTQTVVGNFSENRSYIDNDGVFVGRSRFTFSHTFNPAEPIQLITRYVDDNGRVRNARGIFYHPLSDQNYPSSASGPSEGPQEILNHSAAAASSRTRNSRNQITIPSVRPHVRLPSQVLKNESKTPHDRSLRLYFKSVVDYGNADFVQNNILMRKRVVIEAQVQSILDHLRSGRPLLFEELMVLDYSLVLQAFEHTRIRNLFDVSQPHIGLTAETIMQYITRENFVSPNNEDPEDGEKCVICLEKYEDGDEIGKLDLCVHKFHVQCIKQWLVSRNTCPICKRIALAMNNVVQNEAGAEVNNENVNA 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14853g00001 514 MobiDBLite consensus disorder prediction 108 174 - -
Mupr14853g00001 514 MobiDBLite consensus disorder prediction 276 312 - -
Mupr14853g00001 514 MobiDBLite consensus disorder prediction 39 64 - -
Mupr14853g00001 514 ProSiteProfiles Zinc finger RING-type profile. 447 489 IPR001841 -
Mupr14853g00001 514 MobiDBLite consensus disorder prediction 1 66 - -
Mupr14853g00001 514 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 98 493 IPR045191 GO:0061630
Mupr14853g00001 514 MobiDBLite consensus disorder prediction 108 171 - -
Mupr14853g00001 514 SMART ring_2 447 488 IPR001841 -
Mupr14853g00001 514 Pfam Ring finger domain 446 489 IPR001841 -
Mupr14853g00001 514 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 425 493 IPR013083 -
Mupr14853g00001 514 MobiDBLite consensus disorder prediction 12 27 - -
Mupr14853g00001 514 SUPERFAMILY RING/U-box 427 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14853g00001 Mupr-Chr14853 2243 7856 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14853g00001 384 491 C3H Transcription Factor Family AT2G17450 37.168 1.27e-16 76.3