Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14844g00002 ATGGGTGGAGTTACCAAGCGGGACAAAGACGCGACGACCCGAATGCGAGCAGCGAATCTTTTTCACGCCTTCGTTATCAACTCAAATCAGGGCATGGTAGTTTGCGAGTTAGCGCCGGTGAGAGAGAAACACCCAAACCAAAACACCAACATGGACCTCAGCTTGGATTTGACTTTGGGCTTCGTCCCCAAGCCCATTTCCCTGTTTCTCGGCGACGTTTCTGGAAACAGAGATAAGCCAGAGAAAGTGGCCACGCTCGATGGCTTCGTGCAAAGATTGGAGAACGAATTGAACAAGGTCGAGGCCTTCAAACGCGAGCTTCCTCTTTCCATGCTCCTCCTCAACGATGGTGCGTGCCTTCCATTGTTTTTTACTTATATCATTGTTGTGCGTTTCTTTTTTGATAACGATTTTGCTGGTCATGCAGCTATAGCCAGATTGAAGGAGGAAAAACTTAAGTGTTCGGGAATGCAAGATCCACCTGTCACTGTCACTGTGAGTGAAGAGTTTGTGCCACTCAAAACCATTTCTTGTGAAAATGAAATTGAAAATGAAAATGGAAGCTGTGAGAAGAAGAATTGGATGAGCTCGGCTCAGCTTTGGAGCACTGAAAAAACCAAATCGAGGAATGAAGAAGATGATAGGTCTGTGCCCGTGAACCCAATTAAAGGAAATTCGTGTGCCCCGAGGAAGGAGGGTTCGCAAGTTCCGAGGTTTAGTTTGATGACTCCTGCGTCTGAAGCGAGTCATAGCAATTCCAAGAGTGTTTGTGGAGATAATAGTTCTGGCTCCTCTTTGCGTCGTGTTGAAGTACAGAGTCAGCCACAATTACCACAACATATGCAGCAGAATCCTAGGAAACAAAGGCGGTGCTGGTCGCCGGAGCTTCACCGGCGTTTTGTGGACGCGCTTCAACAACTTGGTGGAGCACAAGTGGCCACTCCTAAACAGATTAGAGAACTGATGCAGGTGGAGGGCCTCACAAATGATGAAGTGAAAAGCCATCTGCAAAAGTACAGGCTTCATGTTAGGAGATTCCCAATTTCTTCAGCTGATAATGGGTCATGGATGGTCCAAGATGAATGTGGGGATAAATCAAAGGGAAGCTTATCACAATCCGGTTCTCCACAAGGTCCTCTTACACCTCTCCTCCTAGGAGGGTCTGTTAAGGGTCTCTCAAGCCCTGGACGGAACAGTGTGGATGCAGAAGATGAGCAATCAGATTGCCGGAATTGGAAAGGAGGGGTCCACCACCAGCTTGAACCTGATAATCATAGCCTCTAA 1284 0.4751 MGGVTKRDKDATTRMRAANLFHAFVINSNQGMVVCELAPVREKHPNQNTNMDLSLDLTLGFVPKPISLFLGDVSGNRDKPEKVATLDGFVQRLENELNKVEAFKRELPLSMLLLNDGACLPLFFTYIIVVRFFFDNDFAGHAAIARLKEEKLKCSGMQDPPVTVTVSEEFVPLKTISCENEIENENGSCEKKNWMSSAQLWSTEKTKSRNEEDDRSVPVNPIKGNSCAPRKEGSQVPRFSLMTPASEASHSNSKSVCGDNSSGSSLRRVEVQSQPQLPQHMQQNPRKQRRCWSPELHRRFVDALQQLGGAQVATPKQIRELMQVEGLTNDEVKSHLQKYRLHVRRFPISSADNGSWMVQDECGDKSKGSLSQSGSPQGPLTPLLLGGSVKGLSSPGRNSVDAEDEQSDCRNWKGGVHHQLEPDNHSL 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14844g00002 427 MobiDBLite consensus disorder prediction 200 289 - -
Mupr14844g00002 427 Gene3D - 286 343 - -
Mupr14844g00002 427 Pfam Myb-like DNA-binding domain 289 340 IPR001005 -
Mupr14844g00002 427 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 284 344 IPR017930 -
Mupr14844g00002 427 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 58 412 IPR044787 GO:0003700|GO:0006355
Mupr14844g00002 427 MobiDBLite consensus disorder prediction 239 289 - -
Mupr14844g00002 427 MobiDBLite consensus disorder prediction 401 427 - -
Mupr14844g00002 427 SUPERFAMILY Homeodomain-like 285 345 IPR009057 -
Mupr14844g00002 427 MobiDBLite consensus disorder prediction 365 379 - -
Mupr14844g00002 427 NCBIfam myb-like DNA-binding domain, SHAQKYF class 287 342 IPR006447 GO:0003677
Mupr14844g00002 427 Coils Coil 86 106 - -
Mupr14844g00002 427 MobiDBLite consensus disorder prediction 354 427 - -
Mupr14844g00002 427 FunFam Myb family transcription factor 286 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14844g00002 Mupr-Chr14844 11793 13722 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14844g00002 51 337 G2-like Transcription Factor Family AT4G37180 38.284 2.01e-48 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mupr14844g00002 Myb_DNA-binding 1.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14844g00002 - - pvu:PHAVU_002G021400g 527.709