Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14842g00003 ATGGAAGGAAATTGTGAATCCCAAGGCTTTAAGGATTTCATGAATGAGAGCAAGTTGATGGATCTTTTGAACAGCTCCGACTATGTCCCGACCTATGAAGACAGGGATGGCGACTGGATGCTTGTCGGTGATGTCCCATGGGAGATGTTTGTTGAATCATGCAAGCGTTTACGTATCATGAAAGGAAAGGAAGCTATTGGACTGGGTCTGCAGCCAGTAGCTAGTACTTGA 231 0.4545 MEGNCESQGFKDFMNESKLMDLLNSSDYVPTYEDRDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLGLQPVAST 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14842g00003 76 Gene3D - 5 74 - -
Mupr14842g00003 76 ProSiteProfiles PB1 domain profile. 1 62 IPR000270 GO:0005515
Mupr14842g00003 76 SUPERFAMILY CAD & PB1 domains 19 61 - -
Mupr14842g00003 76 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 10 67 IPR003311 GO:0005634|GO:0006355
Mupr14842g00003 76 Pfam AUX/IAA family 2 69 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14842g00003 Mupr-Chr14842 30430 31837 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14842g00003 13 70 B3 DNA Binding Superfamily AT1G19220 37.931 5.89e-06 40.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mupr14842g00003 AUX_IAA 2e-35 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14842g00003 K14484 - gmx:547965 143.28