Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14838g00005 ATGGAGACCAGTGAGCATAAGAGCATGTCAGTTAGAGAGTTCCATGCGAATGGAAGTCGCATGATTGCATCAGAAGTTGAGGCCAAACTTGATCAAGGAAATATTCAAGAGGCTGAATCTGCCTTGAGAGAAGGGTTGTCACTTAATTTTGAGGAAGCAAGAGCTCTTCTTGGAAAGTTGGAGTATCAGAGAGGTAATGTAGAAGGTGCTCTTCGTGTGTTTGATGGGATTGATCTCCAAGCTGCCGTACAGCGATTGCAAACTTCCTTTTCTGAAAAAACACCGGGCAAGAAAGGTCGCACTCGCAATGAAGCATCCTCAGTGTCTCAGCATGCTGCTAGTTTGGTGCTTGAAGCCATCTACCTAAAAGCCAAGTCTCTGCAAAAACTGAGGAAATTTACTGAGGCTGCTAATGATTGTAAACGTATTCTTGATGCTGTTGAGAAGATATTTTATGTGGGTATTCCTGATATTCAAGTGGATAGTAAATTGCAAGATATAGTCAGCCATGCTGTAGAGCTCCTTCCAGAGCTTTGGAAACAAGCTGGTTGCTATGATGAGACAATCTTCGCTTATAGGCGAGCCCTTCTTAGTCAATGGAACCTTGATAATGATTTCTGTGCAAGAATTCAGAAGTCATTTGTTGTTTTTTTACTGTACAGTGGGGTGGAGGCAAGGCCACCTAGTTTAGCAGTGCAGGTTGATGGATCATATGTGCCTAAAAATAATCTCGAAGAGGCTATTCTTGTATTGATGATTCTTTTGAAAAAGTTTTGCCTTGGTAAGATGAAATGGGATCCTTCAATCATGGAACACCTGACTTTTGCACTTTCTATATGCAACCAAACTTCTACTTTAGCAAAGCAACTTGAAGAATTGTTGCCTGGAGTATACCATCGAGTTGATTGTTGGAATTCTTTAGCTTTATGTTATAGTGGAGCTGGACAAAATGACAGTGCTTTGAATCTGCTAAGGAAGGCTTTGCACAAACATGAACAACCAAATGACCTTACATCATTGTTGTTAGCTGCCAGGATCTGCAGTGAGGATCCCCATCTTGCTGCGGAAGGAGTGAACTATGCACAGAGGGCAATCAGTAATGCTCATGGCCCAAATGAGCATTTAAAAGGTGTTGCTCTTCGGATGTTGGGACTTTGTCTGGGAAAGCAAGCTAAGGTTTCTTCCTCTGACTATGAGAGGTCTCACCTTCAGTCCAAAGCTCTGGAGTCATTGCAGGAGGCAATTAGATTGGAGCCAAACAATTCTGATCTGATTTTTGACTTGGCTGTTCAGTATGCAGAGCACCGAAATTTGCGTAGTGCTTTGCGCTCTGCAAGGCAATTCTTTAATGAAACAGGGGGTTCTGTACTGAAAGCTTGGAGATTGCTTGCTCTAATTTTGTCTGCGCAACAAAGATTTTCAGAAGCTGAAGTTGTGACAGATGCTGCTTTAGATCAGACTACAAGATGGGAGCAGGGGCCACTGCTTAGGCTGAAAGCAAAGTTGAAGATCTCCCAATCACAACCCATGGAAGCTATTGAAACCTATCGGCACCTTCTTGCATTGGTTCAAACCCAGAAGAAATCCTTTGGGTCTCTCCAAATTAGTTCAAAGGTTGAGGATGATGGAGTAAATGAATTCGAAATTTGGCATGGTCTAGCAAATTTATATGCTAGACTTTCTCATTGGAAGGATGCTGAAGTCTGTTTGCAGAAGGCCAGGAAGTTGAAGAAATACTCTGCAGCATTGATGCACATCGAAGGCAAGACCAAAACCTGTGTTGTGTTTTGTTTGAAGGACGGGGAAAAAATCAAGAAGCTCTTGAAGCTACTATTAATGCGGTACTACTGGAACCAAACTATGTCCCATGCAAGATCTTGA 1881 0.4242 METSEHKSMSVREFHANGSRMIASEVEAKLDQGNIQEAESALREGLSLNFEEARALLGKLEYQRGNVEGALRVFDGIDLQAAVQRLQTSFSEKTPGKKGRTRNEASSVSQHAASLVLEAIYLKAKSLQKLRKFTEAANDCKRILDAVEKIFYVGIPDIQVDSKLQDIVSHAVELLPELWKQAGCYDETIFAYRRALLSQWNLDNDFCARIQKSFVVFLLYSGVEARPPSLAVQVDGSYVPKNNLEEAILVLMILLKKFCLGKMKWDPSIMEHLTFALSICNQTSTLAKQLEELLPGVYHRVDCWNSLALCYSGAGQNDSALNLLRKALHKHEQPNDLTSLLLAARICSEDPHLAAEGVNYAQRAISNAHGPNEHLKGVALRMLGLCLGKQAKVSSSDYERSHLQSKALESLQEAIRLEPNNSDLIFDLAVQYAEHRNLRSALRSARQFFNETGGSVLKAWRLLALILSAQQRFSEAEVVTDAALDQTTRWEQGPLLRLKAKLKISQSQPMEAIETYRHLLALVQTQKKSFGSLQISSKVEDDGVNEFEIWHGLANLYARLSHWKDAEVCLQKARKLKKYSAALMHIEGKTKTCVVFCLKDGEKIKKLLKLLLMRYYWNQTMSHARS 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14838g00005 626 Pfam Tetratricopeptide repeat 28 75 - -
Mupr14838g00005 626 SUPERFAMILY TPR-like 117 442 IPR011990 GO:0005515
Mupr14838g00005 626 Gene3D Tetratricopeptide repeat domain 26 206 IPR011990 GO:0005515
Mupr14838g00005 626 Gene3D Tetratricopeptide repeat domain 236 590 IPR011990 GO:0005515
Mupr14838g00005 626 PANTHER PROTEIN NPG1 5 590 IPR043376 -
Mupr14838g00005 626 SUPERFAMILY TPR-like 26 356 IPR011990 GO:0005515
Mupr14838g00005 626 SUPERFAMILY TPR-like 405 577 IPR011990 GO:0005515
Mupr14838g00005 626 SMART tpr_5 117 150 IPR019734 GO:0005515
Mupr14838g00005 626 SMART tpr_5 301 334 IPR019734 GO:0005515
Mupr14838g00005 626 SMART tpr_5 493 526 IPR019734 GO:0005515
Mupr14838g00005 626 SMART tpr_5 377 421 IPR019734 GO:0005515
Mupr14838g00005 626 SMART tpr_5 547 580 IPR019734 GO:0005515
Mupr14838g00005 626 SMART tpr_5 457 490 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14838g00005 Mupr-Chr14838 29462 35681 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14838g00005 11 589 Calmodulin-binding Proteins AT2G43040 72.414 0.0 837