Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14838g00004 ATGGGTAATCCCCGGAAATCGGGGACTAGCGGCGACCTTCATGTGGCGGCAAGGTCCGGTGATCTTATCGCCGTTCAGTCAATTTTGGCTTCAAATCCTTTGGCCGTTAATTCCAGAGATAAGCATTCCAGAACACCTCTACATTTAGCAGCATTTTCTGGGCAAGCAGAGGTAGTTACTTATCTCTGCAAGCACAAGGCTGATGTTGGTGCTTCTGCAATGGATGACATGGCTGCAGTACACTTTGGTTCACAGAAGGGACATTTAGAAGTTGTTCGAGCTCTACTTTCAGCCGGGGCCTCTCTCAAAGCCTCTACCCGCAAAGGCATGACTTCATTACACTATGCTGCTCAAGGTTCCCATCTGGAACTCGTCAAGTACTTGACCAAGAAAGGGGCAAACCTTGGTGCCAAGACAAAGGCAGGAAAGACCCCTTTGGATCTTGCTACCAATGAAGAAATCCGCTCCTTTCTGGAGGAATTTGAAATGTCAGCTAAGAATGGAGAGTTGGGAAAGAAAGATAAAGATAAAGCTGAAGAATCTGATCCAAAGACATCCGCATTGGGAGCGGAAGGTGATTTGAGTGCTGAAGCTGAACCTGCTGCAGATGCTGTTGATGTAGAAAACAATGAGAGAGAGAAGAGGAAGGGCAATGAAGATGACGCAAGAGAAGAGTCGTCACAACCAAAAAAGGCGAGAGTTAAGTTAAGCCATCTCCAAAGTTCAGACGATAACCAAGAAGAAAACTTGTAG 753 0.4635 MGNPRKSGTSGDLHVAARSGDLIAVQSILASNPLAVNSRDKHSRTPLHLAAFSGQAEVVTYLCKHKADVGASAMDDMAAVHFGSQKGHLEVVRALLSAGASLKASTRKGMTSLHYAAQGSHLELVKYLTKKGANLGAKTKAGKTPLDLATNEEIRSFLEEFEMSAKNGELGKKDKDKAEESDPKTSALGAEGDLSAEAEPAADAVDVENNEREKRKGNEDDAREESSQPKKARVKLSHLQSSDDNQEENL 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14838g00004 250 Pfam Ankyrin repeats (3 copies) 13 71 IPR002110 GO:0005515
Mupr14838g00004 250 Pfam Ankyrin repeats (3 copies) 81 158 IPR002110 GO:0005515
Mupr14838g00004 250 Gene3D - 8 113 IPR036770 -
Mupr14838g00004 250 SUPERFAMILY Ankyrin repeat 13 161 IPR036770 -
Mupr14838g00004 250 ProSiteProfiles Ankyrin repeat profile. 75 107 IPR002110 GO:0005515
Mupr14838g00004 250 ProSiteProfiles Ankyrin repeat region circular profile. 108 140 - -
Mupr14838g00004 250 SMART ANK_2a 8 38 IPR002110 GO:0005515
Mupr14838g00004 250 SMART ANK_2a 75 104 IPR002110 GO:0005515
Mupr14838g00004 250 SMART ANK_2a 108 137 IPR002110 GO:0005515
Mupr14838g00004 250 SMART ANK_2a 42 71 IPR002110 GO:0005515
Mupr14838g00004 250 ProSiteProfiles Ankyrin repeat profile. 108 140 IPR002110 GO:0005515
Mupr14838g00004 250 Gene3D - 114 161 IPR036770 -
Mupr14838g00004 250 ProSiteProfiles Ankyrin repeat region circular profile. 75 104 - -
Mupr14838g00004 250 MobiDBLite consensus disorder prediction 168 250 - -
Mupr14838g00004 250 MobiDBLite consensus disorder prediction 168 186 - -
Mupr14838g00004 250 ProSiteProfiles Ankyrin repeat profile. 42 74 IPR002110 GO:0005515
Mupr14838g00004 250 ProSiteProfiles Ankyrin repeat region circular profile. 42 69 - -
Mupr14838g00004 250 MobiDBLite consensus disorder prediction 205 242 - -
Mupr14838g00004 250 PANTHER ANKYRIN REPEAT PROTEIN 5 204 - -
Mupr14838g00004 250 PRINTS Ankyrin repeat signature 43 58 IPR002110 GO:0005515
Mupr14838g00004 250 PRINTS Ankyrin repeat signature 91 105 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14838g00004 3 160 Ion Channels AT2G26650 29.091 1.02e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14838g00004 - - gmx:100815134 404.445