Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1481g00007 ATGGCTAACAACGTGGTTGTTGCTGTTGCTGTTAAGGTAGCTGCTGTTCCTCTGCCTCCATTACCCATAACATACAATGCTCTCACTTTCAGCCATAAGACTAAGAGCCACCAAAGACACACACTTCATCTTAATTGCTCTCAAACCAAACGCAGAACAACCTCGTTCCCTTCTTCCTTCTCAATCTCATCATCTCCCCTCAGAAACCAACGTAGTTGCTCTGTGTTGGCGTGTCTTTCTCCTGCTTCTTCTGAATCCTCATCCTCGTCTTCCACTGCTAAGCCCTCTTTTCCTTCTCCTTCAACTAAGCTCTATGTCAGTGGGCTATCATTTCGTACCACTGAAGAGAGTTTGCGAAATGCTTTTAAGAATTTTGGTCAACTAGTGGAAGTCAAGCTGGTGATGGATAAAATTGCAAATAGACCGAGAGGGTTTGCTTTTCTTCGTTATGCAACTGAAGAAGAATCTCAGAAGGCTATTGAGGGAATGCATGGAAAGTTCTTGGATGGTAGGGTCATATTTGTGGAAGTTGCCAAGCCGAGATCAGAGCTACCGCAAAGGAACAAGCAAGACACTAGATTGAAAGAAACTCATTTAGCACCAAATGCCATTTCATTACTCCACACTATTGTCAAACTTAATGCCATCCGTGCCTAA 657 0.4353 MANNVVVAVAVKVAAVPLPPLPITYNALTFSHKTKSHQRHTLHLNCSQTKRRTTSFPSSFSISSSPLRNQRSCSVLACLSPASSESSSSSSTAKPSFPSPSTKLYVSGLSFRTTEESLRNAFKNFGQLVEVKLVMDKIANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVIFVEVAKPRSELPQRNKQDTRLKETHLAPNAISLLHTIVKLNAIRA 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1481g00007 218 SUPERFAMILY RNA-binding domain, RBD 92 189 IPR035979 GO:0003676
Mupr1481g00007 218 Gene3D - 34 193 IPR012677 -
Mupr1481g00007 218 SMART rrm1_1 103 176 IPR000504 GO:0003723
Mupr1481g00007 218 FunFam Organelle RRM domain-containing protein 6, chloroplastic 87 193 - -
Mupr1481g00007 218 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 104 173 IPR000504 GO:0003723
Mupr1481g00007 218 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 102 180 IPR000504 GO:0003723
Mupr1481g00007 218 PANTHER NUCLEOLAR PROTEIN 8 86 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1481g00007 Mupr-Chr1481 63293 65915 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1481g00007 88 190 Eukaryotic Initiation Factors Gene Family AT3G16380 34.951 3.77e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1481g00007 - - gmx:100305561 245.743