Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1481g00006 ATGCCTTCTCGAATCCTCCATCTGTTGTTGTTGTTGGCTGCTGGGGTTAGTCTCTGGAGGTATTGGTGTTTTCTCTCTCATTTGGCTCCAATGGAGATGCAGGACCAAATAGAAAGCACGAGATCAACCATATTTGGCTCAGCTAGTAACTGCCATTCCAATGGTGGAAAACAATCTGAAAATGCTGCCCATGTACCGTCTGTTGGAAACAGCCATACTCCAAAGGTGAGGAAACCATATACCATTACTAAACAAAGGGAGAAGTGGACAGAGGAAGAGCATCAAAAGTTCCTTGAAGCTTTGAAATTGTATGGTCGTGGCTGGCGCCAAATTGAAGAGCATATAGGTACCAAAACTGCTGTTCAGATTCGAAGCCATGCTCAAAAATTTTTCTCTAAGGTTGTGAGGGAATCTGAGGGCAGTGCTGAGAGTTCGATACAGCCAATTAACATACCTCCTCCTCGGCCTAAGCGAAAACCCCTCCATCCGTATCCCCGTAAATCTGTTGACTCTTTCAAAGGACACACCATACCAAATGAAACAGAAATATCTCCATCTACAAACCTGTCAGTTGCAGAGAAAGACACCCCATCTCCGACCTCTGTGCTATCTACGGTTGGTTCGGAAGCATTTGGGTCCGCATTTTCAGAGCAGACTAACAGATGCCTTTCACCAAACTCTTGCACCACTGATATTCGCTCAGTCAGCTTGTCACCTGTTGAAAAGGAAAACGATTGCATGACATCCAAAGCATCTGAGGATGTAGAGAAAGGATCACCAGCTTCAGTTCCTTTATCCACTGTTTCTAACCCAAACATGTGCATGAAGTCCGAGTTTAGTTCCAAGGAAACTGAATGTTTCATAGAAGATGCTGTTGCCAATATGCCACAAACCACTAGTATTAAGCTTTTTGGAAGAACAGTCTCTATGGTAGGTAATCAGAAGTCACTGAACATAGATGATGAGAATGGTAAGCCAGTAACTGTAAAGTCTGATGAAGTATGTGATGTTGAGAATGAAAAGCTTGGCCAATCAGGGGAATCCAAGCAAGTAGATACACAATTATCACTAGTTAGTGGTAACTGGTCTATAGCACCTGATGCTGATGGAGCTAATGTGACCAGCATAGAGCCCCCAAAGGAGAACCTATGCTTCAGCGAATGTGCACCTGATGCATCTTTGCCATGTTGGAGTTTGTACCAAGGCCTTCCAGCTTTCCACCCCAGGTCATGCAATCAAATCCTAAATCCAATGCCTCTTAGGCCCTCTCTGAAAGTAAGAACAAGGGAGGAGGGAAGTTGTTGCACTGGTTCCAACACTGAATCAGTTTGTGATATGGAAAGCCAAGGCAAGAACTCAGATGCTGTTGATTCTGTGTGTCAAAAATATCACAAGGAAGAAGCTGCACCCCAGAAGTCTGCTAGGGGATTTGTACCATATAAAAGATGTTTAGCTGAAAGAGATGGAAATTCTTTAATTGTTGCCTTAGAAGAGAGGGAGGGGCAACGGGCACGAATGCAAGGTTTTGGGGAAGGGTCCACAACTGCGATTTTGGCTGCATCATCAAGGTTGAAGGCCTCTCCGACCACAATTGCAACT 1599 0.4447 MPSRILHLLLLLAAGVSLWRYWCFLSHLAPMEMQDQIESTRSTIFGSASNCHSNGGKQSENAAHVPSVGNSHTPKVRKPYTITKQREKWTEEEHQKFLEALKLYGRGWRQIEEHIGTKTAVQIRSHAQKFFSKVVRESEGSAESSIQPINIPPPRPKRKPLHPYPRKSVDSFKGHTIPNETEISPSTNLSVAEKDTPSPTSVLSTVGSEAFGSAFSEQTNRCLSPNSCTTDIRSVSLSPVEKENDCMTSKASEDVEKGSPASVPLSTVSNPNMCMKSEFSSKETECFIEDAVANMPQTTSIKLFGRTVSMVGNQKSLNIDDENGKPVTVKSDEVCDVENEKLGQSGESKQVDTQLSLVSGNWSIAPDADGANVTSIEPPKENLCFSECAPDASLPCWSLYQGLPAFHPRSCNQILNPMPLRPSLKVRTREEGSCCTGSNTESVCDMESQGKNSDAVDSVCQKYHKEEAAPQKSARGFVPYKRCLAERDGNSLIVALEEREGQRARMQGFGEGSTTAILAASSRLKASPTTIAT 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1481g00006 533 ProSiteProfiles SANT domain profile. 84 135 IPR017884 -
Mupr1481g00006 533 FunFam protein REVEILLE 6 isoform X1 88 136 - -
Mupr1481g00006 533 MobiDBLite consensus disorder prediction 51 76 - -
Mupr1481g00006 533 SMART sant 85 133 IPR001005 -
Mupr1481g00006 533 MobiDBLite consensus disorder prediction 174 203 - -
Mupr1481g00006 533 NCBIfam myb-like DNA-binding domain, SHAQKYF class 84 133 IPR006447 GO:0003677
Mupr1481g00006 533 Pfam Myb-like DNA-binding domain 86 129 IPR001005 -
Mupr1481g00006 533 SUPERFAMILY Homeodomain-like 80 134 IPR009057 -
Mupr1481g00006 533 MobiDBLite consensus disorder prediction 137 203 - -
Mupr1481g00006 533 CDD SANT 88 131 IPR001005 -
Mupr1481g00006 533 ProSiteProfiles Myb-like domain profile. 81 131 IPR001005 -
Mupr1481g00006 533 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 81 135 IPR017930 -
Mupr1481g00006 533 Gene3D - 88 135 - -
Mupr1481g00006 533 PANTHER SWI/SNF COMPLEX-RELATED 55 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1481g00006 Mupr-Chr1481 58532 62289 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mupr1481g00006 Myb_DNA-binding 1.9e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1481g00006 - - gmx:778089 829.32