Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1480g00003 ATGGAGCAGGAGGAGCAAGATAGAGCGTTGCCCATTGCAAATGTGGGTCGAATCATGAAGCAAATTCTCCCTCCTAGTGCAAAGATCTCCAAAGAAGGGAAACAAGTAATGCAAGAGTGCGTGACAGAGTTCATTAGTTTTGTGACTGGCGAGGCATCTGACAAGTGTCACAAAGAGAATCGCAAGACCGTTAATGGGGATGACATCTGTTGGGCTCTAAGTTCCTTAGGGTTTGACAACTATGCTGAGGCTATTGGAAGCTATTTGCATAAATACAGGCAAGCTGAAAGGGTGAAAATCAATCAGAACAGCCTTCATCACACCACCAAACAAAACTATGAAGCATCGTCAGCAACAAAAACTCAAATCCGTGCTCCACCACCACCACTATTGTCTAGGGTTACTCACAGTGACAAGTTTCTGTGTCTTTCTGAAGATCGAATTAACAAGGTGATGATGAGAAGAAGCACGCTACTTCTAATTTTGTTGGATATTGTGAGTTTAGTGTTTGAGCAGTTCTCAACCAAAATCCCCACGGTCAAGACTTTCCTCCATTAA 558 0.4319 MEQEEQDRALPIANVGRIMKQILPPSAKISKEGKQVMQECVTEFISFVTGEASDKCHKENRKTVNGDDICWALSSLGFDNYAEAIGSYLHKYRQAERVKINQNSLHHTTKQNYEASSATKTQIRAPPPPLLSRVTHSDKFLCLSEDRINKVMMRRSTLLLILLDIVSLVFEQFSTKIPTVKTFLH 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1480g00003 185 MobiDBLite consensus disorder prediction 109 129 - -
Mupr1480g00003 185 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 3 115 IPR027113 GO:0001228|GO:0006355|GO:0016602
Mupr1480g00003 185 MobiDBLite consensus disorder prediction 109 123 - -
Mupr1480g00003 185 SUPERFAMILY Histone-fold 6 111 IPR009072 GO:0046982
Mupr1480g00003 185 ProSitePatterns NF-YB/HAP3 subunit signature. 40 56 IPR003956 GO:0005634|GO:0006355|GO:0043565
Mupr1480g00003 185 PRINTS CCAAT-binding transcription factor subunit A signature 75 93 - -
Mupr1480g00003 185 PRINTS CCAAT-binding transcription factor subunit A signature 37 55 - -
Mupr1480g00003 185 PRINTS CCAAT-binding transcription factor subunit A signature 56 74 - -
Mupr1480g00003 185 Gene3D Histone, subunit A 1 126 IPR009072 GO:0046982
Mupr1480g00003 185 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 9 73 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1480g00003 Mupr-Chr1480 20283 21727 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1480g00003 5 122 CCAAT-HAP3 Transcription Factor Family AT1G09030 63.559 1.28e-53 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mupr1480g00003 CBFD_NFYB_HMF 6.9e-25 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1480g00003 K08065 - gmx:100815151 210.305