Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14788g00002 ATGAGAAGACGACGAGGAAATATTGGTAGCAGAAGAAATTGCAAGAGAGAGAGGGTTGGATTGAGAATCGAATCTCAATCCTCAACCTCCTCATTTCATTACACACACATCTTCAGATTTCTTCATTCTTCCCTCAATCTTTTCTTTTTCCCCCCTTTGACACCCTCGTTTTCTCCGAAACAAAAACAACAATTATTATTTTTGTTTTTGTTTTCTTGCTTTTTGTTATTTGACCTGGTCGTCGCAGCAGGGTCGGGAGCCACAGCTATGCAGAGCCAACTTGTGTGCAATGGTTGTAGGAGCCTTCTGCTTTACCCGAGAGGGGCAACCAATGTTTGTTGTGCATTGTGCAACACAATTACCTCTGTTCCTCCACCTGGGATGGAAATGTCTCAACTTTACTGTGGAGGCTGTAGGACATTGCTAATGTACACACGAGGAGCTACGAGTGTGAGATGTTCCTGCTGTCACACTGTAAACCTTGTTCCAGCATCTAATCAAGTAGCTCACGTTCATTGTGGGAACTGCCGGACAACACTCATGTATCCTTATGGAGCTCCCTCAGTCAAATGTGCTCTTTGTCACTATATTACTAATGTCAGT 603 0.4362 MRRRRGNIGSRRNCKRERVGLRIESQSSTSSFHYTHIFRFLHSSLNLFFFPPLTPSFSPKQKQQLLFLFLFSCFLLFDLVVAAGSGATAMQSQLVCNGCRSLLLYPRGATNVCCALCNTITSVPPPGMEMSQLYCGGCRTLLMYTRGATSVRCSCCHTVNLVPASNQVAHVHCGNCRTTLMYPYGAPSVKCALCHYITNVS 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14788g00002 201 PANTHER PROTEIN LSD1 89 122 IPR040319 -
Mupr14788g00002 201 NCBIfam zinc finger domain, LSD1 subclass 170 199 IPR005735 -
Mupr14788g00002 201 NCBIfam zinc finger domain, LSD1 subclass 93 123 IPR005735 -
Mupr14788g00002 201 NCBIfam zinc finger domain, LSD1 subclass 132 162 IPR005735 -
Mupr14788g00002 201 Pfam LSD1 zinc finger 96 120 IPR005735 -
Mupr14788g00002 201 Pfam LSD1 zinc finger 173 197 IPR005735 -
Mupr14788g00002 201 Pfam LSD1 zinc finger 135 159 IPR005735 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14788g00002 Mupr-Chr14788 10468 13751 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Mupr14788g00002 zf-LSD1 1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14788g00002 - K12191 gmx:100776394 239.965