Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14783g00002 ATGTGCCTTTTGTTTTCAAAAAAGCAACATCACTCTTCTTCCCTTCAACTTTCACTTCCCCTTAGTTTTCCTCGCTCGGAAATGTCGTCGGCGTGGAGAAGCCAGGGCTCTGGCGGCGAGGACGGGAAGCACTATCCTGCTCCGCTCGCCCCTCACGAGGAAGTCGTCAAGGACTCCACTCTCTTCTGGGACACTCTCAGGCGCTTTCACTTTGTTATCGGTACCAAATTTATGATTCCTGTGATTGGAGGGAAGGAGCTGGATTTGCACGTTCTTTACGTGGAAGTTACGAGAAGAAGTGGCTACGAGAAGGTGGTTGCAGAGAAGAAATGGAGGGAAGTTGGTAGTATTTTTAAGTTCTCAGCCACCACCACAAGCGCTTCTTTTGTACTCAGGAAACATTACTTCAGTCTTCTTTATCATTATGAACAGGTTCACTTTTTTAAAGCTCGGGGTCCTATTTACACTCCATCTGCAGACGCATTTTCCGGCAACAGCCCTTCGTGGAGACCTGAATTAGCTATTGTGGAATATTCGCCTAAGCCGATAAACAACAGTCCTGAATCCCGTGCTGAAGATACTACATGTCTTTTAGGAAATGGAACAATCGAGGGGAAATTTGATTGTGGTTATTTAGTGTCGGTGAAGCTTGGTTCGGAAGTTCTTAAAGGGGTGCTTTACCATCCAGATGAATTGGTTCCTCCACCATCTTTTCCGCAGCATGAGAATGCAATTGTACCCTTCAATCATCGGAAACCTCACCGTTCTGGTCGTAGGAGGAGAAACAAAAGAAGGTGGGACCCAAACTATCCAAAGCCGAATAGGAGTGGCTACAACTTCTTCTTTGCTGAAAAGCATTACACTCTCAAAACCCTTTACCCAAGCAGAGAAAGGGAGTTTACCAAAATGATTGGCCAGTCATGGAACAGTCTTAGCCCTGAAGAAAGAATGGTTTACCAGAACATTGGCTTAAGAGACAAAGAAAGGTACAAGAGAGAGTTGACGGAGTACAAAGAGAAGATGAAGCTTAGGCAGACCCCAGAAGTTGGACAAAACTAG 1059 0.4551 MCLLFSKKQHHSSSLQLSLPLSFPRSEMSSAWRSQGSGGEDGKHYPAPLAPHEEVVKDSTLFWDTLRRFHFVIGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSIFKFSATTTSASFVLRKHYFSLLYHYEQVHFFKARGPIYTPSADAFSGNSPSWRPELAIVEYSPKPINNSPESRAEDTTCLLGNGTIEGKFDCGYLVSVKLGSEVLKGVLYHPDELVPPPSFPQHENAIVPFNHRKPHRSGRRRRNKRRWDPNYPKPNRSGYNFFFAEKHYTLKTLYPSREREFTKMIGQSWNSLSPEERMVYQNIGLRDKERYKRELTEYKEKMKLRQTPEVGQN 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14783g00002 352 ProSiteProfiles ARID domain profile. 56 147 IPR001606 GO:0003677
Mupr14783g00002 352 MobiDBLite consensus disorder prediction 250 271 - -
Mupr14783g00002 352 Pfam HMG (high mobility group) box 271 338 IPR009071 -
Mupr14783g00002 352 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 271 338 IPR009071 -
Mupr14783g00002 352 Pfam ARID/BRIGHT DNA binding domain 61 143 IPR001606 GO:0003677
Mupr14783g00002 352 SUPERFAMILY ARID-like 53 155 IPR036431 GO:0003677
Mupr14783g00002 352 Gene3D High mobility group box domain 255 351 IPR036910 -
Mupr14783g00002 352 Gene3D - 50 152 IPR036431 GO:0003677
Mupr14783g00002 352 SMART ARID_2 53 143 - -
Mupr14783g00002 352 MobiDBLite consensus disorder prediction 251 266 - -
Mupr14783g00002 352 PANTHER HIGH MOBILITY GROUP B PROTEIN 9 33 345 - -
Mupr14783g00002 352 SMART bright_3 57 148 IPR001606 GO:0003677
Mupr14783g00002 352 SUPERFAMILY HMG-box 268 341 IPR036910 -
Mupr14783g00002 352 CDD HMG-box_AtHMGB9-like 271 337 - -
Mupr14783g00002 352 SMART hmgende2 270 339 IPR009071 -
Mupr14783g00002 352 CDD ARID_HMGB9-like 58 143 IPR045303 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14783g00002 Mupr-Chr14783 24670 26976 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14783g00002 43 345 ARID Transcription Factor Family AT1G76110 66.667 2.07e-134 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Mupr14783g00002 ARID 3.4e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14783g00002 - - gmx:100784746 596.66