Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14771g00001 ATGGAACGTGAAGAAGGCAAACAACCTCCCCAAAAAACCCCATTACACTCTCAACTTGAGCAAGTTAATTCCGATAATAATTTTGTTCTAGAAAATGAGCAAAGTGGGACATTCACTACATTTGCATCATTTGAAAGTGAGAGTGAGAGTGATTCCTCTTTTAGCAGCAATTATGATGATGAGGATGCCGAGTTTTTCCTCAGCCAAGAATTTGAAGCAGACCTTCAATTTATTGAGAGTCAAGGAAGTAACAACGATGACGAAGACAACGACGATGAAGTTGATGAAGGAATGGAGGAAGATGATGAGATTGATGTGGATGAATTGACATATGAAGAGTTGATTGAGTTGGGGGATTTTATAGGGCAAGAGAAGAGAGGATTATCAGCAAATGAGATTTGTTCATGCTTGCATTCTCACACTTACCATTGTGCTGAAAACAAAAATGGAACTGATCGCTGTGTGATTTGTCAGATTGAATATGAAGAAGGTGAAACCTTGGTGGCAATCCAGTGTGAACACCCTTACCATACTGATTGCATAAGCAAGTGGCTTCAAATTAAGAAGGTTTGCCCAATATGCAACACTGAAATTTCAGTTCCCAAGATGGAGATACGTAGGAGTAAGAGACAACTCTTGTCAAGTTCACCAAAGCCGAAAACATCCCTCATTTATTTCCGTGGTGACTCCGGTCTCCATGTTCTTTTCCTCGAAAGGATTCTGGACTCCAAGCCTCTATCATTCGTCCACCTGTCGTGGCTTTGGTTGCAACAAATATTAATTTAA 786 0.402 MEREEGKQPPQKTPLHSQLEQVNSDNNFVLENEQSGTFTTFASFESESESDSSFSSNYDDEDAEFFLSQEFEADLQFIESQGSNNDDEDNDDEVDEGMEEDDEIDVDELTYEELIELGDFIGQEKRGLSANEICSCLHSHTYHCAENKNGTDRCVICQIEYEEGETLVAIQCEHPYHTDCISKWLQIKKVCPICNTEISVPKMEIRRSKRQLLSSSPKPKTSLIYFRGDSGLHVLFLERILDSKPLSFVHLSWLWLQQILI 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14771g00001 261 SMART ring_2 154 194 IPR001841 -
Mupr14771g00001 261 MobiDBLite consensus disorder prediction 84 102 - -
Mupr14771g00001 261 SUPERFAMILY RING/U-box 153 201 - -
Mupr14771g00001 261 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 47 199 IPR033276 GO:0004842|GO:0016567|GO:0046621
Mupr14771g00001 261 Pfam Ring finger domain 153 195 IPR001841 -
Mupr14771g00001 261 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 120 201 IPR013083 -
Mupr14771g00001 261 MobiDBLite consensus disorder prediction 1 34 - -
Mupr14771g00001 261 MobiDBLite consensus disorder prediction 79 102 - -
Mupr14771g00001 261 FunFam E3 ubiquitin ligase BIG BROTHER-related 120 201 - -
Mupr14771g00001 261 ProSiteProfiles Zinc finger RING-type profile. 154 195 IPR001841 -
Mupr14771g00001 261 MobiDBLite consensus disorder prediction 11 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14771g00001 Mupr-Chr14771 14769 17595 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14771g00001 102 198 C3H Transcription Factor Family AT3G63530 49.000 8.03e-28 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14771g00001 K19045 - gmx:100780686 295.049