Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14756g00001 ATGTATGGTTCTACTTCCTTTACTACACAACTGGTCCATGACCTTCTCATGGAGTCCAACACAAGAAAGCTACTCCTTCAAGACCCACTTCACCAATCAATAACAAACTCAGCCAACTCCCCAGATTCCATTAAAAGCTACAACTCAACAGAGTCGTATTTCAAAGGCCACGACTTCGATGCAAACGTTGTCATGATACTCTCGGTCCTGTTGTGTGCTGTTATTTGCTCACTCGGGTTGAACTCCATCATAAAGTGTGTCTTGAGGTGTTCCAACATAGTCATCAACGACCCTTCAAGTGCGAACTATAACCCTTCACCGCGATTGGCCAACACAGGAATCAAGAAGAAAGCGCTCAAGACTTTTCCCACTGTAAGCTACTCAACAGAGCTAAAACTCCCGGGTTTGGACACTGAGTGTGTGATATGCCTCTTTGATTTTGCCAATGGCGATAAGGTGCGTATTTTGCCAAAGTGCAACCATGGTTTCCACGTTCGCTGCATTGACAAGTGGCTAAGTTCACACTCATCATGCCCCAAGTGCAGACAGTGCCTCATTGAGACTTGTAAGAAAATTGTTGGATCCCAACAACCAGTACTACCACCAGTGCCAGAAACCATTATAAGGATCCAACCGCTAGAACCTGAATCTTTGGAGCGTAACTATAGGGAACTATGCTAG 681 0.4508 MYGSTSFTTQLVHDLLMESNTRKLLLQDPLHQSITNSANSPDSIKSYNSTESYFKGHDFDANVVMILSVLLCAVICSLGLNSIIKCVLRCSNIVINDPSSANYNPSPRLANTGIKKKALKTFPTVSYSTELKLPGLDTECVICLFDFANGDKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCLIETCKKIVGSQQPVLPPVPETIIRIQPLEPESLERNYRELC 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14756g00001 226 SMART ring_2 140 181 IPR001841 -
Mupr14756g00001 226 PANTHER RING-H2 FINGER PROTEIN ATL78 17 217 IPR044602 GO:0016567|GO:0016740
Mupr14756g00001 226 CDD RING-H2_EL5-like 139 182 - -
Mupr14756g00001 226 FunFam RING-H2 finger protein ATL73 102 187 - -
Mupr14756g00001 226 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 101 186 IPR013083 -
Mupr14756g00001 226 ProSiteProfiles Zinc finger RING-type profile. 140 182 IPR001841 -
Mupr14756g00001 226 Pfam Ring finger domain 139 182 IPR001841 -
Mupr14756g00001 226 SUPERFAMILY RING/U-box 118 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14756g00001 Mupr-Chr14756 5620 6300 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14756g00001 59 186 C3H Transcription Factor Family AT3G10910 54.135 1.24e-43 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14756g00001 K19040 - gmx:100527126 392.119