Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14755g00003 ATGTTTGAATTAGAAAACTACTGCCAAATACAAATTTCTACATTCACTGATGTCATGGTGATGATGAGGGACGAATTTTATGTAACAGATCCGAATGCAGAAGTTATTGCTTTATCACCAACCACATTAATGGCAACAAATAGATTCGTGTGTGAGATCTGCAACAAAGGATTTCAGAGGGACCAAAACCTTCAGTTGCACCGAAGAGGTCACAATCTTCCATGGAAACTGAGGCAGAGAGCAAGCAAAGAGGTGAAGAAAAGGGTTTATGTGTGTCCGGAACCATCATGCGTCCACCATAACCCAGCTCGTGCATTAGGAGACCTCACTGGCATAAAAAAACATTACAACAGAAAACATGGCGAAAAGAAATGGAAATGTGACAAGTGCTCCAAAAGATATGCAGTCCAATCTGATTGGAAGGCCCACCAGAAAACCTGTGGCACAAGGGAATACAAATGTGATTGCGGAACCATATTTTCCAGTGGCTTGGTACATGTGAAGATTGAACACGTGCATTTATCTGAAACTTGCAGAAGAGACAGTTTCATCACACACAGAGCCTTTTGTGACGCATTAAGTGAAGAAAACAAGCGAGGATTAACGAGTGGCATAATGGCAGGAAAGTTGCAAAATAATGAATTGCCGGATTTCATGGGCACAATGCCTCTAAGCAGCAGTTCCAACAACAGTAGTGTACCCGAATTGAACAAGTCCATGGAGATGTTCTCCACCACTTCAGGTACACTCTTTGGTGGTCCAAAAATCATGTCTTATCATCATCCCTCTTCTTCCACCCTTCAACTCAGCTCCAACAACTCTCCTGTTCTCAATTACGCTTCTGCCTCGGCTCACATGTCTGCAACAGCTTTGTTGCATAAAGCAGCCCAAATTGGTGTCACTGCAAGCAACAGCATTAACTCTTCCTATCACCCCTTCAATCCACCACACGTGCCTGCCAACCAACTCATATCTGATATGGGAATGTTCACTCCCATCTTCGTGGGAAGTAGTGACCACAGCCAAGGCTTCATCAAGAACGTCCAACAAGAGGTTGGTGCTTTCATCCATGGAAGAGATGTAGCACAAGGATATCCAATGAGGTTTGGTGTTAGTGCTGACATCACAACGGTTCATGACTTCTTGGGCGTTGGAGGTGCAACTTCACCACAGAAACAACAACAGCAAAGGTTGGAGTTAGAAGCACTAATCCAACAGAGGTTGCAGATTATGAATCACTTTCGGGATTCGGCTTTGGACAAATCCATTTGGGACATTTGA 1281 0.4379 MFELENYCQIQISTFTDVMVMMRDEFYVTDPNAEVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRASKEVKKRVYVCPEPSCVHHNPARALGDLTGIKKHYNRKHGEKKWKCDKCSKRYAVQSDWKAHQKTCGTREYKCDCGTIFSSGLVHVKIEHVHLSETCRRDSFITHRAFCDALSEENKRGLTSGIMAGKLQNNELPDFMGTMPLSSSSNNSSVPELNKSMEMFSTTSGTLFGGPKIMSYHHPSSSTLQLSSNNSPVLNYASASAHMSATALLHKAAQIGVTASNSINSSYHPFNPPHVPANQLISDMGMFTPIFVGSSDHSQGFIKNVQQEVGAFIHGRDVAQGYPMRFGVSADITTVHDFLGVGGATSPQKQQQQRLELEALIQQRLQIMNHFRDSALDKSIWDI 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14755g00003 426 SMART c2h2final6 90 120 IPR013087 -
Mupr14755g00003 426 SMART c2h2final6 49 71 IPR013087 -
Mupr14755g00003 426 SMART c2h2final6 125 145 IPR013087 -
Mupr14755g00003 426 Gene3D Classic Zinc Finger 103 181 - -
Mupr14755g00003 426 ProSiteProfiles Zinc finger C2H2 type domain profile. 49 71 IPR013087 -
Mupr14755g00003 426 ProSitePatterns Zinc finger C2H2 type domain signature. 51 71 IPR013087 -
Mupr14755g00003 426 Gene3D Classic Zinc Finger 29 95 - -
Mupr14755g00003 426 FunFam protein indeterminate-domain 12-like 28 96 - -
Mupr14755g00003 426 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 29 407 IPR031140 -
Mupr14755g00003 426 SUPERFAMILY beta-beta-alpha zinc fingers 48 146 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14755g00003 Mupr-Chr14755 35444 38984 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14755g00003 30 303 IDZ Gene Family AT3G50700 52.648 5.63e-99 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr14755g00003 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14755g00003 - - gmx:100797943 463.381