Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14755g00001 ATGGACTTGTATGGTCGGGGCCCCGCCAGGAATGGATCGAACCCGGTAAACCAACCCGAATGGCGCACACCGGCCACCGACACTGGCCTCGAAGAATCGATGTGGCATTTAACGCTGGGTGGCGGCGAATCTTACCCGGAGCGTCCCGGCGTGGCCAATTGTGTGTATTATATGCGGACAGGTGTGTGTGGATATGGTAGCAGGTGTCGTTACAATCATCCTCGCGATCGTGCTGCGGTTGCTGCGGCAGTAAGAGCTACAGGGGAGTACCCTGAACGGGTGGGAGAACCTCCGTGTCAGTATTATTTAAAGACTGGAGCCTGTAAATTTGGTGCATCCTGTAAATTCCACCATCCTAAAAATGGAGGTGGATATTTAAGCCAAGCTCCATTAAATGTTTATGGAAACCCATTACGGCCGGGTGAGAAAGAATGCTCCTACTATTTGAAAACGGGGCAGTGCAAATTTGGTATATCTTGTAAATTCCATCATCCTCAACCTGCTGGCACATCATTGCCAGCATCTGCACCTCAATTTTATCAACAGGTGCAGTCTCCTACAGTTCCTCTGCCTGAACAGTATGGAGGAGCTTCCACAAGCTTGAGAGTGGCCAGGCCTCCTATATTGCCTGGTTCATATGTACAAGGGGCTTATGGTCATGTACTTCTTTCTCCAGGGGTTGTCCCATTTCCTGGATGGAGTCATTATTCGGCACCTGTAAGTCCTGTGCCATCTCCTGGTGCTCAACCTGCTGTTGGGGCTACTTCTTTATATGGAATGACCCAGTTGTCGTCACCAACATCAGCTTTTGCTAGACCATATACTCCTCTGCCCTCTACTACTGGCCCTTCAGGAAGCAGCCTGAAGGAACAATTATTTCCCGAAAGACCTGGTGAACCAGAATGCCAATACTACCTGAGAACAGGGGACTGTAAATTTGGACTAGCTTGTCGATATCATCATCCTCGGGATCATATTGTGGCACGGCCACTTCTTAGCCCTGTTGGACTTCCTTTACGTCCGGGGATACAACCTTGTGCATTTTATTTGCAAAATGGGCATTGCAAGTTTGGCTCCACGTGCAAATTTGACCATCCTTTGGGATCTATGAGATATAGTCCATCGGCATCTTCTCTCATTGATGTGCCAGTTACTCCATACCCAGTTGGGTCTTTGCTGTCTCAGCTGGCTCCTTCAACAACATCTTCAGAGCTTCGTCCTGAACTGATGTCAGGGTCCAAAAAGGAATCCTTTTCAGCCAGAATACCTTCTTCCGGAAACAGCTCTGGTACTTCTGTGGGTTTAATTTTCTCACCAGGTGGGTCTGTCTCGCTATCTGATTCCTAG 1347 0.4878 MDLYGRGPARNGSNPVNQPEWRTPATDTGLEESMWHLTLGGGESYPERPGVANCVYYMRTGVCGYGSRCRYNHPRDRAAVAAAVRATGEYPERVGEPPCQYYLKTGACKFGASCKFHHPKNGGGYLSQAPLNVYGNPLRPGEKECSYYLKTGQCKFGISCKFHHPQPAGTSLPASAPQFYQQVQSPTVPLPEQYGGASTSLRVARPPILPGSYVQGAYGHVLLSPGVVPFPGWSHYSAPVSPVPSPGAQPAVGATSLYGMTQLSSPTSAFARPYTPLPSTTGPSGSSLKEQLFPERPGEPECQYYLRTGDCKFGLACRYHHPRDHIVARPLLSPVGLPLRPGIQPCAFYLQNGHCKFGSTCKFDHPLGSMRYSPSASSLIDVPVTPYPVGSLLSQLAPSTTSSELRPELMSGSKKESFSARIPSSGNSSGTSVGLIFSPGGSVSLSDS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14755g00001 448 MobiDBLite consensus disorder prediction 398 448 - -
Mupr14755g00001 448 Gene3D - 126 173 - -
Mupr14755g00001 448 PANTHER PROTEIN PHOSPHATASE RELATED 40 388 - -
Mupr14755g00001 448 SUPERFAMILY CCCH zinc finger 301 324 IPR036855 GO:0046872
Mupr14755g00001 448 ProSiteProfiles Zinc finger C3H1-type profile. 93 121 IPR000571 GO:0046872
Mupr14755g00001 448 ProSiteProfiles Zinc finger C3H1-type profile. 48 76 IPR000571 GO:0046872
Mupr14755g00001 448 SUPERFAMILY CCCH zinc finger 141 167 IPR036855 GO:0046872
Mupr14755g00001 448 Gene3D - 46 125 - -
Mupr14755g00001 448 Gene3D - 294 378 - -
Mupr14755g00001 448 MobiDBLite consensus disorder prediction 417 448 - -
Mupr14755g00001 448 MobiDBLite consensus disorder prediction 1 26 - -
Mupr14755g00001 448 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 96 120 IPR000571 GO:0046872
Mupr14755g00001 448 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 344 366 IPR000571 GO:0046872
Mupr14755g00001 448 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 298 323 IPR000571 GO:0046872
Mupr14755g00001 448 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 50 75 IPR000571 GO:0046872
Mupr14755g00001 448 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 141 166 IPR000571 GO:0046872
Mupr14755g00001 448 SUPERFAMILY CCCH zinc finger 96 121 IPR036855 GO:0046872
Mupr14755g00001 448 ProSiteProfiles Zinc finger C3H1-type profile. 340 368 IPR000571 GO:0046872
Mupr14755g00001 448 ProSiteProfiles Zinc finger C3H1-type profile. 139 167 IPR000571 GO:0046872
Mupr14755g00001 448 SUPERFAMILY CCCH zinc finger 51 77 IPR036855 GO:0046872
Mupr14755g00001 448 SMART c3hfinal6 340 367 IPR000571 GO:0046872
Mupr14755g00001 448 SMART c3hfinal6 93 120 IPR000571 GO:0046872
Mupr14755g00001 448 SMART c3hfinal6 296 323 IPR000571 GO:0046872
Mupr14755g00001 448 SMART c3hfinal6 48 75 IPR000571 GO:0046872
Mupr14755g00001 448 SMART c3hfinal6 139 166 IPR000571 GO:0046872
Mupr14755g00001 448 FunFam Zinc finger nuclease 2 47 124 - -
Mupr14755g00001 448 SUPERFAMILY CCCH zinc finger 342 371 IPR036855 GO:0046872
Mupr14755g00001 448 ProSiteProfiles Zinc finger C3H1-type profile. 296 324 IPR000571 GO:0046872
Mupr14755g00001 448 MobiDBLite consensus disorder prediction 275 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14755g00001 Mupr-Chr14755 5259 14171 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14755g00001 1 435 C2H2 Transcription Factor Family AT5G18550 50.873 9.69e-133 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mupr14755g00001 zf-CCCH 2.1e-08 CL0537