Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14727g00002 ATGTTTGTTGCAAGAGTAAAGAGGTGGAGGGCGAAAGTGAAATGTAACGTTCCAACTCTTAAACCATCTATCGCAATCCCTCTCAAAATAAAAAGCAATGCCCTTTTCCTTCTGCAACATCCTTCTCCTTTAACTCTTCACATAGTTTCCAAACCCAGAAGAAGAAGCATGATGCCCAGAATAAACAGCGTGGGCTGGATGGAAGAGCGAGAAGACGAGAACTCCGGAACCGCTTCGTGGGCCAGAAACTCGAAGCCCAACATGATAAGCACAGACACAACAGGGACAACGACAAGGACAAGGAGTGGTTTGGTCGAAAACAGAAACCGCGACGAGCTGGGTTCCCTATGTGGTTTGAAAGCCATGGTCGAAGTGGAGGAAGAATGGTACATACCGAACCAGCATGAGCAAGAAATGAGCTTCTCCCCGGACAGCCTATTACTCCACGGCGTGGACTCTTCGTCGTCGTCGTCTGTCTTCAACAACCTGGACCCGTCCTCGTCGCAGCTCCAGTACTTCCTCCCTCCCAACCCCAAACCCTCCCTTCCCAACCCCTTCGATATGGGCTTCCTTGACCCTCAAGCTTCCTTCTTAAATCTCCCCTCTGACACCTTCGCCGGCTTTCACACCTTCCAAGAGGGCTCTTCCAAGCCTCTCTTTCTCAACAGGTCCAACATTCTCAGACCCCTCGACTCCCTCCCCCCCTCCGGCGCCCAACCCACTCTTTTCCAGAAGAGAGCCGCTCTCAGGAAAAACATCGCCTCCAAGGACAAGGATCACCTCAACGAGGACTCCACTTTCGATGCCTCCCCCTTCAATTACGACTCTGATGACTTCACTGACAGTTACAATACCAACAACAACAAGTTCGATGAAGTTAATGCTGCCAAGAACGCTGCAAACAGCTCCAACGGCAACAGCACCGTCACCGGTTTGGATCACAAAGGAAAGAAGAAGGGAATGCCTGCCAAGAATTTGATGGCTGAACGACGCCGTAGGAAGAAACTCAATGATAGACTCTACATGCTCAGGTCCGTCGTTCCTAAGATTAGCAAAATGGACAGGGCTTCAATCCTTGGGGATGCAATTGAGTATCTTAAGGAGCTTCTGCAAAGGATCAATGATCTTCACAACGAGTTGGAGTCCACGCCGGCTGCTTCTTCCCTCACTCCTTCCTCCACTTTCCATCCTTTGACGCCTACTCCTCCTACACTGCCAAGCCGTATCAAAGAAGAACTCTGCCCCACCTCCTTGCCCAGCCCCAATGGCCAACCTGCTAGGGTGGAGGTGCGGCTGCGCGAAGGAAGGGCTGTTAACATCCACATGTTTTGTGCCCGCAAACCTGGTCTGTTGCTCTCAACCATGAGGGCTATGGATAACCTTGGATTAGACATTCAGCAGGCTGTTATCAGCTGTTTCAATGGATTTGCTATGGATATTTTTCGAGCCGAGCAATGCAAAGAAGGTCAGGATGTCCATCCGGAGCAAATCAAAGCAGTTCTCTTGGATTCAGCTGGCTACAATGGCATGATGTAA 1536 0.5046 MFVARVKRWRAKVKCNVPTLKPSIAIPLKIKSNALFLLQHPSPLTLHIVSKPRRRSMMPRINSVGWMEEREDENSGTASWARNSKPNMISTDTTGTTTRTRSGLVENRNRDELGSLCGLKAMVEVEEEWYIPNQHEQEMSFSPDSLLLHGVDSSSSSSVFNNLDPSSSQLQYFLPPNPKPSLPNPFDMGFLDPQASFLNLPSDTFAGFHTFQEGSSKPLFLNRSNILRPLDSLPPSGAQPTLFQKRAALRKNIASKDKDHLNEDSTFDASPFNYDSDDFTDSYNTNNNKFDEVNAAKNAANSSNGNSTVTGLDHKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELESTPAASSLTPSSTFHPLTPTPPTLPSRIKEELCPTSLPSPNGQPARVEVRLREGRAVNIHMFCARKPGLLLSTMRAMDNLGLDIQQAVISCFNGFAMDIFRAEQCKEGQDVHPEQIKAVLLDSAGYNGMM 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14727g00002 511 CDD ACT_UUR-ACR-like 440 500 - -
Mupr14727g00002 511 FunFam BHLH transcription factor 316 384 - -
Mupr14727g00002 511 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 320 369 IPR011598 GO:0046983
Mupr14727g00002 511 Pfam Helix-loop-helix DNA-binding domain 327 369 IPR011598 GO:0046983
Mupr14727g00002 511 CDD bHLH_AtAMS_like 323 394 - -
Mupr14727g00002 511 MobiDBLite consensus disorder prediction 299 320 - -
Mupr14727g00002 511 MobiDBLite consensus disorder prediction 68 100 - -
Mupr14727g00002 511 MobiDBLite consensus disorder prediction 77 100 - -
Mupr14727g00002 511 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 323 388 IPR036638 GO:0046983
Mupr14727g00002 511 Coils Coil 359 383 - -
Mupr14727g00002 511 SMART finulus 326 375 IPR011598 GO:0046983
Mupr14727g00002 511 Gene3D - 314 384 IPR036638 GO:0046983
Mupr14727g00002 511 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 199 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14727g00002 Mupr-Chr14727 8222 11502 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14727g00002 222 484 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 68.821 1.82e-110 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr14727g00002 HLH 1.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14727g00002 - - gmx:100217332 575.089