Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14727g00001 ATGGCATCATCGGAGGTGACGATGAAGGGAAATTGCTTGAACCATAACGACGGCGGAACTGCGGAGGCTCATTCGCCGACCACGGCGAAAGACGCGGAAGCAGCACTTTTCAGGGAACTGTGGCACGCCTGTGCTGGTCCTCTCGTGACGGTGCCAAGGGAAAGAGAGCGCGTCTTTTATTTTCCTCAGGGACATATTGAGCAGGTGGAGGCGTCGACGAATCAGGTGGCGGACCAGCACATGCCGGTTTACAATCTCCCACCCAAGATCCTTTGTCGGGTCATCAACGTGCAGCTGAAGGCGGAGCCCGACACGGATGAGGTGTTTGCCCAGGTGACCTTGCTTCCGGAGCCAAATCAAGATGAGAATGCCGCGGAGAAAGAACCTCCGCCGCCTCCGCTGCCGCGGTTTCACGTTCATTCTTTCTGTAAGACTCTGACGGCGTCCGATACCAGTACCCATGGTGGGTTTTCCGTTCTGAGACGGCATGCTGATGAGTGTCTTCCTCCTCTGGATATGTCGAAGCAGCCACCCACCCAAGAGTTGGTGGCTAAGGATCTTCATTCGAATGAATGGCGATTTAAACATATCTTTCGAGGTCAACCCCGTAGACACTTGCTTCAGAGTGGTTGGAGTGTTTTTGTCAGCTCCAAAAGGCTTGTCGCTGGGGACGCATTTATATTTCTCAGAGGTGAGAATGGGGAACTTCGTGTTGGTGTGAGGCGAGCAATGAGACAGCAGGGTAACGTTCCATCCTCGGTTATCTCCAGCCACAGCATGCATCTCGGGGTCCTTGCAACTGCTTGGCATGCCATCTTGACGGGGACCATTTTCACTGTTTATTACAAGCCTAGGACCAGTCCCGCTGAATTTATTGTTCCGTATGATCAATATATGGAATCTCTAAAGAATAATTATAGCATCGGGATGCGGTTCAAAATGAGGTTTGAAGGTGAAGAGGCTCCAGAGCAGAGATTTACTGGTACTATTGTTGGAATAGAAGATTCCGATGCCAATAGGTGGAGAGATTCCAAATGGAGATGCCTGAAGGTGAGATGGGATGAAACATCTAATACACCTCGTCCTGAGAGAGTTTCCCCTTGGAAAATAGAGCCTGCACTTGCTCCTCCAGCCCTGAATCCTCTTTCAATGCCCAGGCCTAAACGGCCTCGGTCTAATGCAGTTCCTTCATCCCCAGATTCTTCTGTTCTTACTCGTGAAGCATCATCTAAAGTAAGCATAGACCCTTCACCGACTAATGGGTTTCCAAGGGTCTTGCAAGGTCAAGAATTATCGACCTTGAGAGGCAATTTTGCAGTAAGCAACGGGTCTGAGACTGCTGAGAAGTCTGGTGTTTGGCCACCTGCAGTAGATGATGAAAAGATTGATGTTGTTTCTACTTCAAGGAGGCCTGGTTCAGATATCTGGATGTCAATGGGGAGGAATGAACCTACATATTCGGATCTTCTTTCAAGCTTTGGGGCCAGTTGCGATCCTTCTCATTCATCCTTGATGGATCAAATGAGCCCTGTAGCTTATCCTGGTAGAAAGCAATCGTTGGATCGAGAAGGCAAACTTCACATGCCTCATCCGTGGCCTGTAATGCCCTCTAGTCTGTCATTGAACATCTTGGACTCTAATACAAAAGGTCCTGCACATGGTGGTGATACAACTTACCAAGCTCGAGGGAATTTGAGGTACAGTGCATTTGGTGAATACCCTGCTCTGCATGGTCATAAAGTTGAGCATTCACATGGAAACTTGATGCCACCCCCACCTGCACCTCTAACTCAATATCAGAGTCCTTGTTCAAGAGAGCTTGTGTCAAAACCAGTGTCAGCAAAAACTTACGAGGCTGTGAAACTAAAAGATGGTGACTGTAAGCTATTTGGCATCTCACTTATCAGTGGGCCCATTGTACCAGAGCCTTCTGTATCCCAAAGAAATGGGAGTGAGCCTGCTGGTCAGATGCATCTTACAGCACACCAACAAAGAACATCTGAAAATGATCAGAAGTCAGACCACTCAAAGGGCTCATGCCCTGCAGATGATCTAGTTGTCGATGACCATGACAGGACATTACAGACTTCTCAGCTGCATATGAAAGATGTTCAATCTAAACCTCTCAGTGGTTCTGCTAGGAGTTGCACTAAAGTTCACAAGAAGGGCATTGCACTTGGTAGGTCAGTGGACCTTACGAAGTACAGTGGCTATGAAGAATTAGTTACTGAATTGGACCAGCTGTTTGAATTTGGGGGTGAATTATTGTCAACCAAAAAAGATTGGCTTATTGTCTATACTGATAATGAGGGTGATATGATGCTTGTAGGAGATGATCCATGGCAGGAATTCTGTGCTATGGTTCGCAAAATTTATATCTACCCTAAAGAGGAGATCCAGAAAATGAGCCCGGGTACCTTGAGTTCAAAAAATGAAGAGAATCAGTCGGCTAGTGAAGGCGCAGATGCAAAAGAAGTTAAATGTCAGCCGCATCAAAAGTTCAATTCAGAAAATGGCCTTGACGCTTGA 2529 0.4745 MASSEVTMKGNCLNHNDGGTAEAHSPTTAKDAEAALFRELWHACAGPLVTVPRERERVFYFPQGHIEQVEASTNQVADQHMPVYNLPPKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAAEKEPPPPPLPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHSNEWRFKHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDANRWRDSKWRCLKVRWDETSNTPRPERVSPWKIEPALAPPALNPLSMPRPKRPRSNAVPSSPDSSVLTREASSKVSIDPSPTNGFPRVLQGQELSTLRGNFAVSNGSETAEKSGVWPPAVDDEKIDVVSTSRRPGSDIWMSMGRNEPTYSDLLSSFGASCDPSHSSLMDQMSPVAYPGRKQSLDREGKLHMPHPWPVMPSSLSLNILDSNTKGPAHGGDTTYQARGNLRYSAFGEYPALHGHKVEHSHGNLMPPPPAPLTQYQSPCSRELVSKPVSAKTYEAVKLKDGDCKLFGISLISGPIVPEPSVSQRNGSEPAGQMHLTAHQQRTSENDQKSDHSKGSCPADDLVVDDHDRTLQTSQLHMKDVQSKPLSGSARSCTKVHKKGIALGRSVDLTKYSGYEELVTELDQLFEFGGELLSTKKDWLIVYTDNEGDMMLVGDDPWQEFCAMVRKIYIYPKEEIQKMSPGTLSSKNEENQSASEGADAKEVKCQPHQKFNSENGLDA 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14727g00001 842 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 35 803 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mupr14727g00001 842 SMART B3_2 142 244 IPR003340 GO:0003677
Mupr14727g00001 842 MobiDBLite consensus disorder prediction 665 686 - -
Mupr14727g00001 842 MobiDBLite consensus disorder prediction 640 664 - -
Mupr14727g00001 842 ProSiteProfiles B3 DNA-binding domain profile. 142 244 IPR003340 GO:0003677
Mupr14727g00001 842 Gene3D - 305 375 - -
Mupr14727g00001 842 Gene3D - 710 803 - -
Mupr14727g00001 842 FunFam Auxin response factor 305 377 - -
Mupr14727g00001 842 FunFam Auxin response factor 140 244 - -
Mupr14727g00001 842 Pfam AUX/IAA family 755 801 IPR033389 -
Mupr14727g00001 842 MobiDBLite consensus disorder prediction 1 23 - -
Mupr14727g00001 842 SUPERFAMILY DNA-binding pseudobarrel domain 139 271 IPR015300 -
Mupr14727g00001 842 Gene3D - 139 244 IPR015300 -
Mupr14727g00001 842 Pfam B3 DNA binding domain 142 243 IPR003340 GO:0003677
Mupr14727g00001 842 FunFam Auxin response factor 710 803 - -
Mupr14727g00001 842 ProSiteProfiles PB1 domain profile. 714 796 IPR000270 GO:0005515
Mupr14727g00001 842 MobiDBLite consensus disorder prediction 640 686 - -
Mupr14727g00001 842 MobiDBLite consensus disorder prediction 1 27 - -
Mupr14727g00001 842 MobiDBLite consensus disorder prediction 817 831 - -
Mupr14727g00001 842 SUPERFAMILY CAD & PB1 domains 716 791 - -
Mupr14727g00001 842 MobiDBLite consensus disorder prediction 803 842 - -
Mupr14727g00001 842 MobiDBLite consensus disorder prediction 394 423 - -
Mupr14727g00001 842 CDD B3_DNA 140 242 IPR003340 GO:0003677
Mupr14727g00001 842 MobiDBLite consensus disorder prediction 376 423 - -
Mupr14727g00001 842 Pfam Auxin response factor 268 350 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14727g00001 Mupr-Chr14727 2624 7392 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14727g00001 1 827 B3 DNA Binding Superfamily AT5G62000 63.837 0.0 1063
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mupr14727g00001 B3 1.2e-20 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14727g00001 - - gmx:100803498 1560.43