Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14714g00001 ATGGCGTGTCGGCGCGTGATAGGGCTTGTTTCCAAGGCTAACATGGAACCCCAGCTTTCAAGTAATGGACTTTCCCTTCAACACCCCCTCGTTGATGGGTCTCCATCCGAATTTGGATGTGGGTATTATGGGTGCTCGCACTATAAAAGGAGATGCAAGATCATAGCGCCATGTTGCAATGAAATCTTCGATTGCCGACATTGTCATAACGAATCCAAGAATTCAATTGAAGTCAATCCTATTGACCGGCATGACGTTCCTCGTCATGAGGTGAAGAGGGTGGTCTGTTCCTTGTGTAGCACAGAGCAAGATGTAAGTGTCATACTGCCAGTTAAAGTTTACAGTAGAGGCAGGCATCGAATCCGGGTTCAACAGATGTGCATTCACTGTGGTGTTTGCATGGGTAGATACTTCTGCTCCAAATGCAAGTTTTTCGACGACGATGTATCAAAAAATCAATACCATTGTGATGAATGTGGCATCTGCAGAACTGGTGGTAAAGAGAACTTTTTCCACTGCAACAAATGTGGATGTTGTTATTCATCAATATTGAAGGATTCACACAACTGTATTGAAAAAGCAATGCATCACAATTGTGCAGTTTGTTTTGAGTTTCTTTTTGATACAACGAAAGACATTACTGTATTGCCATGTGGTCACACCATACACTTGGAATGTGTGAAACAAATGGAACAACATTTGCGGTATGCATGCCCAGTTTGCTCAAAGTCTTTCTGCGACATGTCGCATGTGTGGGAGAAATTGGATGAGGAGGTTGCATCAATGCCTATGCCTGAAATCTATCAAAATAAGATGGTTTGGATTCTTTGCAACGACTGCGGGAAAACAACCGAAGTAAGTTTTCATATTGCTGCACACAAGTGCCTTAAATGCAAGTCCTATAACACCAGAAAGACTCAAGCTCCACCTGTTTCTTGCTCATCGAGGATGGAAGAGATGGTTAGATGA 969 0.4283 MACRRVIGLVSKANMEPQLSSNGLSLQHPLVDGSPSEFGCGYYGCSHYKRRCKIIAPCCNEIFDCRHCHNESKNSIEVNPIDRHDVPRHEVKRVVCSLCSTEQDVSVILPVKVYSRGRHRIRVQQMCIHCGVCMGRYFCSKCKFFDDDVSKNQYHCDECGICRTGGKENFFHCNKCGCCYSSILKDSHNCIEKAMHHNCAVCFEFLFDTTKDITVLPCGHTIHLECVKQMEQHLRYACPVCSKSFCDMSHVWEKLDEEVASMPMPEIYQNKMVWILCNDCGKTTEVSFHIAAHKCLKCKSYNTRKTQAPPVSCSSRMEEMVR 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14714g00001 322 ProSiteProfiles Zinc finger CTCHY-type profile. 134 198 IPR017921 -
Mupr14714g00001 322 SUPERFAMILY CHY zinc finger-like 42 133 IPR037274 GO:0008270
Mupr14714g00001 322 Pfam zinc-RING finger domain 198 243 IPR001841 -
Mupr14714g00001 322 SUPERFAMILY Zinc hairpin stack 135 192 IPR037275 -
Mupr14714g00001 322 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 192 244 IPR013083 -
Mupr14714g00001 322 Gene3D - 270 314 - -
Mupr14714g00001 322 ProSiteProfiles Zinc finger RING-type profile. 199 242 IPR001841 -
Mupr14714g00001 322 Pfam Zinc-ribbon 246 304 IPR039512 -
Mupr14714g00001 322 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 37 308 - -
Mupr14714g00001 322 ProSiteProfiles Zinc finger CHY-type profile. 38 132 IPR008913 GO:0008270
Mupr14714g00001 322 Pfam CHY zinc finger 45 144 IPR008913 GO:0008270
Mupr14714g00001 322 SUPERFAMILY RING/U-box 198 248 - -
Mupr14714g00001 322 SMART ring_2 199 241 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14714g00001 Mupr-Chr14714 1041 3712 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14714g00001 43 315 C2H2 Transcription Factor Family AT3G18290 37.410 2.27e-48 172