Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14713g00001 ATGGGACGTGTGATCCGTGCGCAGCGTAAGGGTGCAGGTTCAGTGTTCAAGTCACACACCCACCACCGCAAGGGTCCAGCTAGGTTCCGCAGCCTGGACTTCGGCGAGAGGAATGGTTACCTCAAGGGCGTGGTGACCGACGTTATCCACGATCCGGGTCGCGGTGCCCCACTGGCCAAGGTCTCCTTCCGCCACCCCTTCAGGTATCAGAAGCAGAATGAGCTCTTCATCGCCGCCGAGGGCCTCTACACCGGCCAGTTCATCTACTGCGGCAAGAAGGCCACCCTCGTCGTCGGCAACGTCCTCCCCATCCGATCCATCCCCGAAGGTGCCGTCATCTGCAACGTCGAACACCATGTTGGTGACCGCGGCGTCTTCGCTAGGGCCTCCGGTGACTATGCTATTGTTATCAGCCACAACCCTGATAATGATACCTCTAGGGCCATGATTGGGCAAGTTGCAGGTGGTGGAAGGACTGAGAAGCCTCTTCTTAAGGCTGGAAATGCTTACCACAAGTTTAGAGTGAAGAGGAATTGCTGGCCGAAGGTGCGTGGTGTTGCTATGAACCCTGTTGAGCATCCTCACGGAGGAGGTAATCACCAGCATATTGGACATGCTAGTACAGTCAGGCGTGATGCTCCTCCTGGACAGAAGGTTGGTCTCATTGCTGCTAGGAGGACTGGTCGTCTTAGAGGACAAGCTGCTGCAACCGCTGCTAAGGCTGATAAGGGGTATTCTTTGATTAAGTTCTGCCCCAATAACCGTGATTTTCAATTTAGTTTCTTTTTCAAATTAATTCCCATACGTCTAGTTGTTCTCAATTCTGGCCCTGCCTTATGTAGATGTGGTAACATGAAGTTGATTGAACTTTATGCTCGGAGTAGTACCCAATGA 894 0.5291 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDVIHDPGRGAPLAKVSFRHPFRYQKQNELFIAAEGLYTGQFIYCGKKATLVVGNVLPIRSIPEGAVICNVEHHVGDRGVFARASGDYAIVISHNPDNDTSRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKGYSLIKFCPNNRDFQFSFFFKLIPIRLVVLNSGPALCRCGNMKLIELYARSSTQ 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14713g00001 297 FunFam 60S ribosomal protein L2 154 231 - -
Mupr14713g00001 297 SUPERFAMILY Translation proteins SH3-like domain 99 230 IPR008991 -
Mupr14713g00001 297 Gene3D Ribosomal protein L2, domain 3 154 231 IPR014726 -
Mupr14713g00001 297 ProSitePatterns Ribosomal protein L2 signature. 181 192 IPR022671 GO:0003735|GO:0005840|GO:0006412
Mupr14713g00001 297 Pfam Ribosomal Proteins L2, RNA binding domain 13 90 IPR022666 GO:0003735|GO:0005840|GO:0006412
Mupr14713g00001 297 PANTHER RIBOSOMAL PROTEIN L2 2 239 IPR002171 GO:0003735|GO:0005840|GO:0006412
Mupr14713g00001 297 SUPERFAMILY Nucleic acid-binding proteins 1 97 IPR012340 -
Mupr14713g00001 297 SMART Ribosomal_L2_2 11 90 IPR002171 GO:0003735|GO:0005840|GO:0006412
Mupr14713g00001 297 Gene3D - 90 153 IPR014722 -
Mupr14713g00001 297 FunFam 60S ribosomal protein L2 1 86 - -
Mupr14713g00001 297 Pfam Ribosomal Proteins L2, C-terminal domain 98 209 IPR022669 GO:0003735|GO:0005840|GO:0006412
Mupr14713g00001 297 Gene3D - 1 86 IPR012340 -
Mupr14713g00001 297 SMART Ribosomal_L2_C_2 96 215 IPR022669 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14713g00001 Mupr-Chr14713 5203 7891 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14713g00001 1 242 Cytoplasmic Ribosomal Protein Gene Family AT4G36130 86.822 4.92e-167 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14713g00001 K02938 - gmx:547677 461.455