Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14711g00003 ATGTGTGGGGGTTCTATCATTTCTGATTACATAGACGTGGATTTGAAGAGTGGTCGGAAATTGACCACCCAAGACCTCTGGTCTGAGCTCAACACTTTCTCTGACTTTCTAGGTTTCGACGCCACCTCTTCTTCCAAACACCAACTTTCCTCCCTTCACCACTCTCAAGATCCCAATATCCCTCCGCTTCCAAAAAACCAAGTGGTGGCATGTGAGAAGCTGAAGAAGAAAAGTGTGGTTGCAGAGAAGGGAACAGGAACAGGTAAGAGTGGTGAGAATGAGGGAAAAGTTGGGGGGCGTGTACGGAAGAACGTGTACAGAGGAATAAGACAAAGGCCATGGGGAAAGTGGGCTGCGGAGATAAGGGACCCACATAAGGGTGTGCGAGTGTGGCTGGGTACATTCAGCAGTGCCGAAGATGCCGCTCGAGCATACGACGAGGCCGCCAAGCGCATCCGCGGAGACAAGGCCAAGCTAAACTTCCCCCACCACACACCCAAGAAGCGCAGCCTTAGCCCCGAGTTGAGTCAGCCCTGTTATGAACCCACTTTTAATAATCCGCAGGAGGGAGAACGGGATCCTGAGCTGAAGCACCAGATCTCCAACCTGGAAACGTTCCTTGGTTTGGAGCATGAACAGCCTCAACCTCAGCCTCCGATGCTGCCGCTTGCTGAGTGGGACTCGCTCTACGCAGATCTGTGGACGCTCGACGACGTCGTTATGCCCAACCGCCATCACTTCTGA 744 0.5296 MCGGSIISDYIDVDLKSGRKLTTQDLWSELNTFSDFLGFDATSSSKHQLSSLHHSQDPNIPPLPKNQVVACEKLKKKSVVAEKGTGTGKSGENEGKVGGRVRKNVYRGIRQRPWGKWAAEIRDPHKGVRVWLGTFSSAEDAARAYDEAAKRIRGDKAKLNFPHHTPKKRSLSPELSQPCYEPTFNNPQEGERDPELKHQISNLETFLGLEHEQPQPQPPMLPLAEWDSLYADLWTLDDVVMPNRHHF 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14711g00003 247 Pfam AP2 domain 105 154 IPR001471 GO:0003700|GO:0006355
Mupr14711g00003 247 Gene3D AP2/ERF domain 105 164 IPR036955 GO:0003700|GO:0006355
Mupr14711g00003 247 SMART rav1_2 105 168 IPR001471 GO:0003700|GO:0006355
Mupr14711g00003 247 CDD AP2 106 164 IPR001471 GO:0003700|GO:0006355
Mupr14711g00003 247 MobiDBLite consensus disorder prediction 159 193 - -
Mupr14711g00003 247 FunFam Ethylene-responsive transcription factor 2 104 163 - -
Mupr14711g00003 247 PANTHER DNA-BINDING DOMAIN 73 187 IPR044808 GO:0003700|GO:0009873
Mupr14711g00003 247 SUPERFAMILY DNA-binding domain 105 163 IPR016177 GO:0003677
Mupr14711g00003 247 PRINTS Ethylene responsive element binding protein signature 128 144 IPR001471 GO:0003700|GO:0006355
Mupr14711g00003 247 PRINTS Ethylene responsive element binding protein signature 106 117 IPR001471 GO:0003700|GO:0006355
Mupr14711g00003 247 ProSiteProfiles AP2/ERF domain profile. 105 162 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14711g00003 Mupr-Chr14711 22242 23916 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14711g00003 1 240 AP2-EREBP Transcription Factor Family AT3G16770 44.964 5.37e-55 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr14711g00003 AP2 8.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14711g00003 K09286 - gmx:100779626 217.624