Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14704g00001 ATGAAGAACTTTTGTGAGAAAGGCTTTGGTTCTACTCATTTAACATCTCCTTGTACTCTTGGATGCTCATCACAGGGGACTTCCTTGGAATCTGATGTTCAGCAATCATTCATGTCCAAAAGTCTGCAATGCCATAAGACTAAGCGGTTGTGTTTTCAATCTCAAGACCAAGATTCATCTTCATCTCAATCAACCTGTCAGTCTTATCCTGGAGTTGGTTCAGCGCAATCAGGAAAAGTCTCTCACAACGTCTACATCAAGAGACTAAAAATATGTAGCAATTCTTCTGCTTGTTCAACACTTAACACAACTGGGGGAATGGAAGCTTTCATCAGGTCATCTGCAGGGGGTCAGGATTTTACCTTCCCTCCATCACAAATGTGTCACAACCAATCAGTTGCTCATACTGCATTCCACCTTGCTGATCCATGCTTTAGTGGCCTAGTAGCTGCTCCATATGGGCCACCGCCTAATATTCATCATGCTCAGCTAATAGGAATGCCTCCGGCTCGAATTCCTCTGCCGCTCGATCTCAGTGAGGAGCCCATATATGTGAACGCGAAGCAGTACCATGCTATTCTGAGGCGCAGGCAATACCGTGCGAAACTTGAAGCGCAGAACAGACTCATCAAAGAACGGAAAGTAAGTGCATTCTTGTTTCCTCACCTTTCTTATGTCAAATTTCTCTTTAACAACACTACCAACACTGTTCTGCAGCCATATCTTCACGAGTCACGCCATATACATGCACTGAAGAGAGCCAGAGGTTCCGGTGGACGCTTCTTGAATACCAAAAAGCCCGAAGAGTCAAAGCTCACTTCAGCAAACCATCCGAGCTGTACTAATTTGAATCTGAGTGGGAATATGTCAGAATATGAGGTGCATCCAGCGGAAAACTTAAACTACAGAGATGGTGCTTCCACCACCACCTGTTCTGTTATTACTAGTGCATCTAACAGTGATGATGTTTTCCACCAACATGAGTCAGACTTTAGACTATGTGGTTTCCCTTCTCATGGTGGAAGGAACATGCAGGGTTACTCTGCCCATATAAGTGGTAGTGGAAACCAACATCGGCTATCAAGAAATTGA 1092 0.4432 MKNFCEKGFGSTHLTSPCTLGCSSQGTSLESDVQQSFMSKSLQCHKTKRLCFQSQDQDSSSSQSTCQSYPGVGSAQSGKVSHNVYIKRLKICSNSSACSTLNTTGGMEAFIRSSAGGQDFTFPPSQMCHNQSVAHTAFHLADPCFSGLVAAPYGPPPNIHHAQLIGMPPARIPLPLDLSEEPIYVNAKQYHAILRRRQYRAKLEAQNRLIKERKVSAFLFPHLSYVKFLFNNTTNTVLQPYLHESRHIHALKRARGSGGRFLNTKKPEESKLTSANHPSCTNLNLSGNMSEYEVHPAENLNYRDGASTTTCSVITSASNSDDVFHQHESDFRLCGFPSHGGRNMQGYSAHISGSGNQHRLSRN 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14704g00001 363 ProSiteProfiles NF-YA/HAP2 family profile. 179 264 IPR001289 GO:0003700|GO:0006355
Mupr14704g00001 363 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 181 261 IPR001289 GO:0003700|GO:0006355
Mupr14704g00001 363 ProSitePatterns NF-YA/HAP2 subunit signature. 184 204 IPR018362 GO:0003677|GO:0016602
Mupr14704g00001 363 Gene3D - 179 266 - -
Mupr14704g00001 363 SMART cbf3 178 264 IPR001289 GO:0003700|GO:0006355
Mupr14704g00001 363 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 36 322 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14704g00001 Mupr-Chr14704 2177 5673 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14704g00001 47 351 CCAAT-HAP2 Transcription Factor Family AT1G17590 40.741 1.92e-50 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Mupr14704g00001 CBFB_NFYA 2.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14704g00001 K08064 - gmx:100500765 457.988