Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1468g00013 ATGGCATCGGCCTTCGTCAAGCTCGATGATTCCCCTATGTTCCAGAAGCAGTTATTTTCTATTGAAGAAACAACTGATGAGTTGAAGGATCGGTGCCAGAAACTATATAAAGGGTGTAAGAAGTTTATGACAGCGTTGGGGGAAGCATATAATGCAGAAATTGCCTTTGCCGATTCATTAGAAATATTTGGTGGTGGCCAAGATGACCCTGTCAGTGTATCAATTGGAGGGCCTGTCATATCTAAGTTTATTAACACACTGCATGAGCTGGCTACTTTTAAAGAGCTTCTTCGTTCACAGGTAGAACATGTGTTGATTGACCGGCTGACAGAGTTTATGAATGTTGATTTGCAAGATGCAAAGGATTCTCGCCGTCGTTTTGACAAAGCTGTGCATTCTTATGATCAGTCACGAGAAAAGTTTGTTTCTTTGAAGAAGAATACACCACAAGATGTCGTTGCTGAATTAGAAGAGGATTTACAAAATTCAAAGTCAACATTTGACAAAAGTCGCTTCAATCTAGTAAACTCTCTCATGAATATTGAAGTGAAAAAGAAGTACGAGTTTTTGGAGTCTATTAGTGCAATAATGGATGCGCATTTGAGATATTTTAAGCTGGGTCATGACTTACTTAGCCAAATGGAGCCCTATATTCACCAGGTGCTAACATACGCACAGCAATCTAAAGAACTGGCTAATGTTGAGCAAGATAAGCTTGCTAAGAGGATTCAGGAATACAGAACACAGGCAGAGCTGGAGAATGTACAAGCTTCTAGCAATTTTATAGAAACCATGCCAGCTTCTGATAGCACGCATGTTGTAGGTTTGAACTCTTACAGAAGTTTGGAAGCAGGGATGCAGTCTGCAACCAAAGGGGAGGCAAGTTATTTGTTAAATACATTGATACAAACAGTTAAACAGGGCTATCTGTTAAAACGATCATCAAGCTCGCGCGGAGATTGGAAACGGAGGTTCTTTGTACTTGATAACCATGGGAATTTATATTATTACAGAGTTAAGGGTGTCAAACCCATGGGCTCTCAGTCATATAATTATACTCGTTCTTCTGAACAAAATAGCGGCATGTTTGGTAGATTCCGTTCAAGACACAACAGGGCTGTATCATTTAATGAGGATATTTTAGGTTGTTGTACAGTTGATCTATGTACTTCCACCATAAAGATGGATGCAGAGGATACGGATCTACGACTCTGCTTTCGAATAATTTCTCCCTCAAAAACATACACACTACAGGCTGAAAATGAAGCTGATAGGATGGACTGGGTAAACAAAATTACTGGAGCTATCACATCACTTTTTAAGTCTCAGTTTCTTCAACAGCCTCAATATGGTAGAGTGCATTCACCGAATAAAAACTCAGCAATTGGTGCTTCTTTGGCAAGTCAATCAGAGGATAGTCATAAATCATTGAGGGATGACATATATTCCAAGGAAATGGGTAGTGTCTCTAAGATTTTAAGGGGAATTCCTGGGAATGATAAATGTGCTGAGTGCAGTGCTCCTGAACCAGACTGGGCATCTCTAAACCTTGGCATATTGCTGTGTATTGAATGCTCTGGAGTACATAGAAATCTTGGAGTTCATGTCTCAAAGGTGAGATCTATAACATTAGATGTTAGGGTTTGGGAACCTACCGTTTTGGAGTTATTTGATAACTTAGGTAATGATTATTGTAATTCTATCTGGGAGGGCTTGCTTCTACCTGATCATGGAAGGGTTGGTGAATCAAATGTGCCTATGAAACCTTGCTCTGCAGATGCCTTCCAACACAAGGAGAAGTACATCCAAGCAAAGTACGTAGAGAAATCACTAATCATCCGAGAAGAGGATATACCTGAGAATCCTCCAGTTTCCATAAGAATCTGGCAAGCAGTTCAGGCTGAAAATGTACGCGAAGTGTATCGCCTTATTGTCACATCAACAACAAATCTGATAAACACAAAATATGATGAGGTTCACCAAGCCGATGCTGAAGGACATCAGCATGATTCTGAAGCCTGTCTGAGATTTGAGACTACTGAGACAGAGAGGTGTTTCCGTGGATGGTCATTATTACATCTGGCATGTCATTCTGAAGGTGCACTGATGGTTGAATTGTTGCTCCAATTTGGTGCTGATGTAAACATATGTGACTATCATGGACGAACTCCCTTGCACCATTGCATTTCAAGTGGGAAAAATCAATTGGCAAAGTTTCTACTAAGAAGGGGTGCAAGGCCGTCAGTCAAAGATGCTGGTGGACTCACTGTACTTGAAAGAGCAATGGAGATGGGAGCAATAACTGACGAAGAGTTATTTATCAAGCTTGCTGAATGCCAGTGA 2343 0.4059 MASAFVKLDDSPMFQKQLFSIEETTDELKDRCQKLYKGCKKFMTALGEAYNAEIAFADSLEIFGGGQDDPVSVSIGGPVISKFINTLHELATFKELLRSQVEHVLIDRLTEFMNVDLQDAKDSRRRFDKAVHSYDQSREKFVSLKKNTPQDVVAELEEDLQNSKSTFDKSRFNLVNSLMNIEVKKKYEFLESISAIMDAHLRYFKLGHDLLSQMEPYIHQVLTYAQQSKELANVEQDKLAKRIQEYRTQAELENVQASSNFIETMPASDSTHVVGLNSYRSLEAGMQSATKGEASYLLNTLIQTVKQGYLLKRSSSSRGDWKRRFFVLDNHGNLYYYRVKGVKPMGSQSYNYTRSSEQNSGMFGRFRSRHNRAVSFNEDILGCCTVDLCTSTIKMDAEDTDLRLCFRIISPSKTYTLQAENEADRMDWVNKITGAITSLFKSQFLQQPQYGRVHSPNKNSAIGASLASQSEDSHKSLRDDIYSKEMGSVSKILRGIPGNDKCAECSAPEPDWASLNLGILLCIECSGVHRNLGVHVSKVRSITLDVRVWEPTVLELFDNLGNDYCNSIWEGLLLPDHGRVGESNVPMKPCSADAFQHKEKYIQAKYVEKSLIIREEDIPENPPVSIRIWQAVQAENVREVYRLIVTSTTNLINTKYDEVHQADAEGHQHDSEACLRFETTETERCFRGWSLLHLACHSEGALMVELLLQFGADVNICDYHGRTPLHHCISSGKNQLAKFLLRRGARPSVKDAGGLTVLERAMEMGAITDEELFIKLAECQ 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1468g00013 780 ProSiteProfiles Ankyrin repeat profile. 720 752 IPR002110 GO:0005515
Mupr1468g00013 780 SUPERFAMILY BAR/IMD domain-like 8 326 IPR027267 -
Mupr1468g00013 780 SUPERFAMILY ArfGap/RecO-like zinc finger 490 612 IPR037278 -
Mupr1468g00013 780 ProSiteProfiles ARF GTPase-activating proteins domain profile. 487 619 IPR001164 GO:0005096
Mupr1468g00013 780 ProSiteProfiles Ankyrin repeat region circular profile. 687 718 - -
Mupr1468g00013 780 Gene3D - 625 773 IPR036770 -
Mupr1468g00013 780 ProSiteProfiles Ankyrin repeat region circular profile. 720 751 - -
Mupr1468g00013 780 Gene3D - 302 450 IPR011993 -
Mupr1468g00013 780 Pfam BAR domain of APPL family 8 230 IPR004148 GO:0005515|GO:0005737
Mupr1468g00013 780 SMART 5bar 13 220 IPR004148 GO:0005515|GO:0005737
Mupr1468g00013 780 CDD ArfGap 491 606 - -
Mupr1468g00013 780 Coils Coil 229 249 - -
Mupr1468g00013 780 Pfam Ankyrin repeats (3 copies) 687 751 IPR002110 GO:0005515
Mupr1468g00013 780 Pfam PH domain 305 436 IPR001849 -
Mupr1468g00013 780 CDD PH_ACAP 306 440 - -
Mupr1468g00013 780 Gene3D Arfaptin homology (AH) domain/BAR domain 7 253 IPR027267 -
Mupr1468g00013 780 PANTHER CENTAURIN/ARF 3 777 IPR045258 GO:0005096
Mupr1468g00013 780 SUPERFAMILY PH domain-like 300 451 - -
Mupr1468g00013 780 CDD BAR_SFC_plant 16 217 IPR035670 -
Mupr1468g00013 780 PRINTS HIV Rev interacting protein signature 499 518 IPR001164 GO:0005096
Mupr1468g00013 780 PRINTS HIV Rev interacting protein signature 541 562 IPR001164 GO:0005096
Mupr1468g00013 780 PRINTS HIV Rev interacting protein signature 518 535 IPR001164 GO:0005096
Mupr1468g00013 780 SMART arf_gap_3 487 619 IPR001164 GO:0005096
Mupr1468g00013 780 Gene3D Arf GTPase activating protein 468 619 IPR038508 -
Mupr1468g00013 780 ProSiteProfiles Ankyrin repeat profile. 687 719 IPR002110 GO:0005515
Mupr1468g00013 780 Pfam Putative GTPase activating protein for Arf 491 611 IPR001164 GO:0005096
Mupr1468g00013 780 SUPERFAMILY Ankyrin repeat 628 775 IPR036770 -
Mupr1468g00013 780 ProSiteProfiles PH domain profile. 303 437 IPR001849 -
Mupr1468g00013 780 SMART ANK_2a 687 716 IPR002110 GO:0005515
Mupr1468g00013 780 SMART ANK_2a 720 749 IPR002110 GO:0005515
Mupr1468g00013 780 SMART PH_update 304 439 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1468g00013 Mupr-Chr1468 85240 97397 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1468g00013 497 545 C2H2 Transcription Factor Family AT3G07940 65.306 1.26e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1468g00013 K12489 - gmx:100796740 1395.95