Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14663g00001 CAATTCAACTCTTTCTACTTCCTTCTGCTTTTCACAACACCCAACTCATTCACCACGCGCCCAACAACATATTCCTCTACTCGCTCACCTTTAGCTTCCACAATCATGTCTCAGACTAACTGGGAAGCCGATAAGATGTTAGATGTTTACATCCATGATTATCTTGTGAAGAGGGATTTGAAGGCTTCTGCTCAGGCTTTTCAAGCTGAGGGAAAAGTATCCTCGGACCCTGTTGCTATTGATGCCCCGGGAGGTTTTCTGTTCGAGTGGTGGTCGGTTTTCTGGGATATATTTATTGCAAGGACTAATGAGAAGCACTCAGAGGTTGCTGCATCGTATATTGAGACACAAATAATAAAGGCAAGGGAGCAACAGCAACAGCAACAACAGCAGCAGCCGCAACCCCAGCAGTCACAGCATCAACAACAGCAGCATCAACAACAGATCCAGATGCAACAGCTCCTGTTGCAGAGAGCACAGCAGCAGCAGCAGCAACAACAGCAACAACAACAGCAGCAGCAACAACAACAGCCACAGCCGCAGCAACAGCAGCCGCAACCACAACAACAGCAGAGTAGGGATAGGGCTCATCTTTTAAATGGCAGTGCAAATGGGTTAGTTGGAAACCCTGGAACTGCAAATGCACTAGCAACAAAAATGTATGAGGAAAGGTTAAAACTTCCCCTTCAAAGGGATTCTATGGATGATGCAGCAATGAAGCAAAGATTTGGTGAGAACATGGGTCAACTCATGGACCCCAATCATGCATCGATATTAAAGTCAGCTGCAGCTCCTGGCCAACCTTCAGGGCAAGTTTTGCATGGTGCTGCTGGTGGGATGTCTCCACAAGTTCAAGCTCGTACTCAGCAGTTACCAGGGTCTACTCTGGATATAAAGGGTGAGATTGGTCCTGTTTTAAATCCCAGAGCTGCGGGTCCTGAAGGATCATTGATGGCAATGCCTGGATCAAATCAAGGTAGCAACAATTTGACATTGAAAGGGTGGCCACTGACAGGTTTGGAGCAACTGCGCTCTGGTCTACTCCAGCAACAAAAACCTTTCATACAAGCTCCTCAGCCTTTTCATCAACTTCAAATGTTGACACCACAGCATCAGCAACAGCTTATGCTGGCGCAACAAAATTTGGCGTCACCATCTACCAGTGAAGAAAGTAGAAGACTAAGAATGCTATTGAATAATAGGAGTATTGGTCTGAATAAGGATGGTCTTTCAAATGCTGTTGGTGATGTGGTATCAAATGTTGGATCCCCTCTTCAAGGTGGTGGTCCGCCTTTTCCTCGTGGAGATACAGATATGCTAATGAAGTTGAAACTGGCTCAGTTACAGCAGCAACAGTCAAGTACCAATGCACAGCAGCAGCAACTTCAACAGCATGCCCTTTCAAATCAGCAATCTCAGACTTCTAATCATAGCATGCATCAGCAAGATAAAGTAGGGGGAGGTGGTGGCAGTGTCACTGTGGATGGTAGCATGTCAAACTCATTTAGAGGAAATGACCAGGTTTCAAAAAACCAGATTGGGAGAAAGCGAAAGCAGCCTGTATCCTCGTCAGGTCCTGCCAACAGTTCAGGAACAGCAAATACGACAGGTCCGTCACCAAGTTCAGCACCCTCAACTCCCTCAACTCATACACCTGGAGATGTGATATCAATGCCTGCCTTGCCTCATAGTGGTAGTTCTTCAAAGCCTCTAATGATGTTTGGCACTGATGGCACTGGAACACTTACATCACCTTCTAACCAGTTGTGGGATGATAAGGATCTTGAATTGCAGGCTGATGTGGATCGCTTTGTGGAGGATGGATCTCTAGATGAAAATGTTGAGTCTTTTTTATCCCATGATGATACAGACCCTAGAGATACTGTTGGCCGTTGTATGGATGTAAGCAAAGGGTTCACATTTTCTGATGTAAGTTCTGTACGGGCAAGCACAAGCAAAGTTGTCTGTTGCCATTTCTCATCTGATGGGAAATTACTTGCAAGTGGTGGGCATGACAAAAAGGCTGTTTTATGGTACACGGATTCTCTAAAACAAAAAGCTACTCTTGAAGAGCATTCCTCTTTGGTTACTGACGTCCGATTCAGTCCAAGCATGCCTCGTCTTGCAACATCTTCATTTGACAAAACTGTCAGGGTTTGGGATGTTGACAATCCTGGTTATTCACTTCGCACCTTCACGGGACATTCTGCATCTGTTATGTCACTAGATTTTCATCCAAATAAAGATGACCTTATCTGCTCTTGTGATGGTGATGGTGAGATACGGTATTGGAGCATAAACAATGGCAGTTGTGCTAGAGTCTTCAAGGGTGGGACCACCCAGATGAGATTTCAACCTCGTCTTGGGAGGTACCTTGCTGCAGCTGCAGAGAACATTGTGTCTATATTTGAAGTGGAGACACAAGCGTGTCGATATTCATTTAAGGGACACACAAAAACGGTAGATTGTGTGTGTTGGGACCCTTCTGGGGAGTTGCTGGCATCTGTGAGTGAGGACTCTGTGAGGGTTTGGACTCTTGGATCAGGGAGTGAAGGGGAATGTGTTCATGAACTTAGCTGTAATGGGAATAAGTTTCATTCATGTGTTTTCCACCCAACCTACCCTTCATTGCTGTCATTGGAGCTGTGGAACATGAGCGAGAACAAGACAATGACTCTGTCTGCTCATGATGGTCTTATTACTGCCTTGGCTGTTTCAACTGTAAATGGTTTGATTGCTTCTGCCAGTCATGACAAGTTCGTCAAACTCTGG 2772 0.4549 QFNSFYFLLLFTTPNSFTTRPTTYSSTRSPLASTIMSQTNWEADKMLDVYIHDYLVKRDLKASAQAFQAEGKVSSDPVAIDAPGGFLFEWWSVFWDIFIARTNEKHSEVAASYIETQIIKAREQQQQQQQQQPQPQQSQHQQQQHQQQIQMQQLLLQRAQQQQQQQQQQQQQQQQQQPQPQQQQPQPQQQQSRDRAHLLNGSANGLVGNPGTANALATKMYEERLKLPLQRDSMDDAAMKQRFGENMGQLMDPNHASILKSAAAPGQPSGQVLHGAAGGMSPQVQARTQQLPGSTLDIKGEIGPVLNPRAAGPEGSLMAMPGSNQGSNNLTLKGWPLTGLEQLRSGLLQQQKPFIQAPQPFHQLQMLTPQHQQQLMLAQQNLASPSTSEESRRLRMLLNNRSIGLNKDGLSNAVGDVVSNVGSPLQGGGPPFPRGDTDMLMKLKLAQLQQQQSSTNAQQQQLQQHALSNQQSQTSNHSMHQQDKVGGGGGSVTVDGSMSNSFRGNDQVSKNQIGRKRKQPVSSSGPANSSGTANTTGPSPSSAPSTPSTHTPGDVISMPALPHSGSSSKPLMMFGTDGTGTLTSPSNQLWDDKDLELQADVDRFVEDGSLDENVESFLSHDDTDPRDTVGRCMDVSKGFTFSDVSSVRASTSKVVCCHFSSDGKLLASGGHDKKAVLWYTDSLKQKATLEEHSSLVTDVRFSPSMPRLATSSFDKTVRVWDVDNPGYSLRTFTGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCARVFKGGTTQMRFQPRLGRYLAAAAENIVSIFEVETQACRYSFKGHTKTVDCVCWDPSGELLASVSEDSVRVWTLGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLSLELWNMSENKTMTLSAHDGLITALAVSTVNGLIASASHDKFVKLW 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14663g00001 924 MobiDBLite consensus disorder prediction 447 571 - -
Mupr14663g00001 924 SUPERFAMILY WD40 repeat-like 646 924 IPR036322 GO:0005515
Mupr14663g00001 924 Coils Coil 445 465 - -
Mupr14663g00001 924 PANTHER TRANSCRIPTION ACTIVATOR MSS11 35 924 - -
Mupr14663g00001 924 Gene3D - 783 924 IPR015943 GO:0005515
Mupr14663g00001 924 CDD WD40 647 924 - -
Mupr14663g00001 924 ProSiteProfiles LIS1 homology (LisH) motif profile. 43 75 IPR006594 GO:0005515
Mupr14663g00001 924 MobiDBLite consensus disorder prediction 493 553 - -
Mupr14663g00001 924 Pfam WD domain, G-beta repeat 728 765 IPR001680 GO:0005515
Mupr14663g00001 924 Pfam WD domain, G-beta repeat 648 678 IPR001680 GO:0005515
Mupr14663g00001 924 Pfam WD domain, G-beta repeat 686 721 IPR001680 GO:0005515
Mupr14663g00001 924 Pfam WD domain, G-beta repeat 810 844 IPR001680 GO:0005515
Mupr14663g00001 924 Pfam WD domain, G-beta repeat 888 924 IPR001680 GO:0005515
Mupr14663g00001 924 MobiDBLite consensus disorder prediction 171 194 - -
Mupr14663g00001 924 MobiDBLite consensus disorder prediction 124 145 - -
Mupr14663g00001 924 ProSitePatterns Trp-Asp (WD) repeats signature. 708 722 IPR019775 -
Mupr14663g00001 924 ProSiteProfiles Trp-Asp (WD) repeats profile. 647 688 IPR001680 GO:0005515
Mupr14663g00001 924 Gene3D - 611 782 IPR015943 GO:0005515
Mupr14663g00001 924 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 893 924 - -
Mupr14663g00001 924 ProSiteProfiles Trp-Asp (WD) repeats profile. 814 854 IPR001680 GO:0005515
Mupr14663g00001 924 FunFam Transcriptional corepressor LEUNIG 626 780 - -
Mupr14663g00001 924 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 732 770 - -
Mupr14663g00001 924 Pfam LisH 45 71 IPR006594 GO:0005515
Mupr14663g00001 924 SMART Lish 43 75 IPR006594 GO:0005515
Mupr14663g00001 924 ProSiteProfiles Trp-Asp (WD) repeats profile. 893 924 IPR001680 GO:0005515
Mupr14663g00001 924 Coils Coil 142 176 - -
Mupr14663g00001 924 MobiDBLite consensus disorder prediction 447 482 - -
Mupr14663g00001 924 SMART WD40_4 851 884 IPR001680 GO:0005515
Mupr14663g00001 924 SMART WD40_4 807 845 IPR001680 GO:0005515
Mupr14663g00001 924 SMART WD40_4 768 804 IPR001680 GO:0005515
Mupr14663g00001 924 SMART WD40_4 886 924 IPR001680 GO:0005515
Mupr14663g00001 924 SMART WD40_4 725 765 IPR001680 GO:0005515
Mupr14663g00001 924 SMART WD40_4 640 679 IPR001680 GO:0005515
Mupr14663g00001 924 SMART WD40_4 682 721 IPR001680 GO:0005515
Mupr14663g00001 924 ProSiteProfiles Trp-Asp (WD) repeats profile. 732 774 IPR001680 GO:0005515
Mupr14663g00001 924 ProSiteProfiles Trp-Asp (WD) repeats profile. 689 724 IPR001680 GO:0005515
Mupr14663g00001 924 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 689 724 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14663g00001 Mupr-Chr14663 7061 17362 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr14663g00001 692 924 Miscellaneous Gene Families AT5G08390 23.849 3.17e-13 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Mupr14663g00001 WD40 5.1e-05 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14663g00001 - - gmx:100816263 1309.66