Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr14656g00001 ATGAAGAGTGCAAAAGGCAAGGGAGCAGCGAGGACCTCAAAAGAAGCTCTGAAGCCTGTTGATGACCGAAAGGTTGGAAAGCGGAAGGCTCCTGCTAGGCCTGAAAAGAGTAGTGCACCAAAAGCAAAGAAGGAGAAGAAGGCCAAGAAAGACCCCAACAAGCCTAAAAGACCACCCAGTGCTTTCTTTGTGTTCCTTGAGGAGTTCAGGAAGACCTTTAAGGCTGAGAATCCTAATGTGAAGGCTGTATCAGCTGTTGGGAAAGCTGGAGGAGAGAAATGGAAATCCTTGTCCAATGCTGAGAAAGCTCCATATGAAGCCAAGGCTGCAAAAAGGAAAGTTGAGTATGAAAAACTTATGAAAGCTTATGATAAAAAGCAGGCAAGCTCTGCAGATGATGATGAATCGGACAAGTCCAAATCTGAAGTGAATGATGAAGATGAAGAAGCCAGTGGAGAGGAGGACCACCAAGAGGAGGAGGATGAGGAGGAGGAGGAGGAAGAGGATGATGAAGACGATGACTGA 525 0.4648 MKSAKGKGAARTSKEALKPVDDRKVGKRKAPARPEKSSAPKAKKEKKAKKDPNKPKRPPSAFFVFLEEFRKTFKAENPNVKAVSAVGKAGGEKWKSLSNAEKAPYEAKAAKRKVEYEKLMKAYDKKQASSADDDESDKSKSEVNDEDEEASGEEDHQEEEDEEEEEEEDDEDDD 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr14656g00001 174 MobiDBLite consensus disorder prediction 88 111 - -
Mupr14656g00001 174 SMART hmgende2 54 125 IPR009071 -
Mupr14656g00001 174 MobiDBLite consensus disorder prediction 1 59 - -
Mupr14656g00001 174 MobiDBLite consensus disorder prediction 139 174 - -
Mupr14656g00001 174 MobiDBLite consensus disorder prediction 123 138 - -
Mupr14656g00001 174 Gene3D High mobility group box domain 36 141 IPR036910 -
Mupr14656g00001 174 SUPERFAMILY HMG-box 40 124 IPR036910 -
Mupr14656g00001 174 CDD HMG-box_AtHMGB1-like 56 116 - -
Mupr14656g00001 174 Coils Coil 149 173 - -
Mupr14656g00001 174 MobiDBLite consensus disorder prediction 123 174 - -
Mupr14656g00001 174 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 55 124 IPR009071 -
Mupr14656g00001 174 MobiDBLite consensus disorder prediction 8 56 - -
Mupr14656g00001 174 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 1 159 IPR031061 -
Mupr14656g00001 174 Pfam HMG (high mobility group) box 55 123 IPR009071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr14656g00001 Mupr-Chr14656 3165 6106 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Mupr14656g00001 HMG_box 1.9e-24 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr14656g00001 K25507 - gmx:100499704 171.785